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Last updated: 2022/11/18

Search Assembled RNA-Seq

next from show/43914
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1 A_BomoMG_comp100087_c0_seq1
1285bp
FPKM:8.15 TPM:6.44
2 A_BomoMG_comp100098_c0_seq1
951bp
 PREDICTED:_E3_ubiquitin-protein_ligase_UBR3-like,_partial_[Papilio_xuthus]
GO:0000151 C ubiquitin ligase complex
GO:0001701 P in utero embryonic development
GO:0001967 P suckling behavior
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007608 P sensory perception of smell
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042048 P olfactory behavior
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
FPKM:5.95 TPM:4.70
3 A_BomoMG_comp100264_c0_seq1
258bp
 nonstructural_protein_2_[Penaeus_monodon_circovirus_VN11]
FPKM:7.40 TPM:5.84
4 A_BomoMG_comp100639_c0_seq1
566bp
FPKM:3.28 TPM:2.59
5 A_BomoMG_comp100736_c0_seq1
1810bp
 PREDICTED:_E3_ubiquitin-protein_ligase_RNF34_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0002020 F protease binding
GO:0002039 F p53 binding
GO:0002947 C tumor necrosis factor receptor superfamily complex
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0010762 P regulation of fibroblast migration
GO:0010804 P negative regulation of tumor necrosis factor-mediated signaling pathway
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019901 F protein kinase binding
GO:0031625 F ubiquitin protein ligase binding
GO:0032006 P regulation of TOR signaling
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0055038 C recycling endosome membrane
GO:0061630 F ubiquitin protein ligase activity
GO:0070936 P protein K48-linked ubiquitination
GO:1901797 P negative regulation of signal transduction by p53 class mediator
GO:1902042 P negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:2001271 P negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis
FPKM:6.96 TPM:5.50
6 A_BomoMG_comp100758_c0_seq1
559bp
FPKM:5.41 TPM:4.27
7 A_BomoMG_comp101121_c0_seq1
632bp
 PREDICTED:_peptidyl-prolyl_cis-trans_isomerase-like_3_[Amyelois_transitella]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0006457 P protein folding
GO:0016853 F isomerase activity
GO:0071013 C catalytic step 2 spliceosome
FPKM:10.03 TPM:7.93
8 A_BomoMG_comp101139_c0_seq1
2206bp
 putative_peroxisomal_acyl-CoA_oxidase_1_[Agrotis_segetum]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
FPKM:7.20 TPM:5.68
9 A_BomoMG_comp101152_c0_seq1
298bp
FPKM:1.48 TPM:1.17
10 A_BomoMG_comp101182_c0_seq1
1935bp
FPKM:5.23 TPM:4.13
11 A_BomoMG_comp101219_c0_seq1
227bp
FPKM:7.90 TPM:6.24
12 A_BomoMG_comp1012773_c0_seq1
231bp
 pyrroline-5-carboxylate_reductase_[Papilio_xuthus]
GO:0004735 F pyrroline-5-carboxylate reductase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006561 P proline biosynthetic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0034599 P cellular response to oxidative stress
GO:0055114 P obsolete oxidation-reduction process
GO:0055129 P L-proline biosynthetic process
FPKM:0.44 TPM:0.35
13 A_BomoMG_comp101306_c0_seq1
5039bp
 PREDICTED:_leucine-rich_repeat-containing_G-protein_coupled_receptor_5_[Bombyx_mori]
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032474 P otolith morphogenesis
FPKM:5.21 TPM:4.12
14 A_BomoMG_comp101322_c0_seq1
263bp
FPKM:10.29 TPM:8.13
15 A_BomoMG_comp101410_c0_seq1
433bp
FPKM:3.25 TPM:2.57
16 A_BomoMG_comp101449_c0_seq1
1235bp
 mariner_transposase_C9_mutant_[Mutagenesis_vector_pCAM45]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:7.70 TPM:6.08
17 A_BomoMG_comp101453_c0_seq1
1905bp
 AMP-activated_protein_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003682 F chromatin binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004679 F AMP-activated protein kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006694 P steroid biosynthetic process
GO:0006695 P cholesterol biosynthetic process
GO:0006853 P carnitine shuttle
GO:0006914 P autophagy
GO:0006950 P response to stress
GO:0007050 P regulation of cell cycle
GO:0007165 P signal transduction
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008610 P lipid biosynthetic process
GO:0010468 P regulation of gene expression
GO:0010508 P positive regulation of autophagy
GO:0014850 P response to muscle activity
GO:0016055 P Wnt signaling pathway
GO:0016126 P sterol biosynthetic process
GO:0016236 P macroautophagy
GO:0016239 P positive regulation of macroautophagy
GO:0016241 P regulation of macroautophagy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0031588 C nucleotide-activated protein kinase complex
GO:0031669 P cellular response to nutrient levels
GO:0032007 P negative regulation of TOR signaling
GO:0035174 F histone serine kinase activity
GO:0035404 P histone-serine phosphorylation
GO:0035556 P intracellular signal transduction
GO:0035690 P cellular response to xenobiotic stimulus
GO:0042149 P cellular response to glucose starvation
GO:0042304 P regulation of fatty acid biosynthetic process
GO:0042593 P glucose homeostasis
GO:0042752 P regulation of circadian rhythm
GO:0043066 P negative regulation of apoptotic process
GO:0045821 P positive regulation of glycolytic process
GO:0046872 F metal ion binding
GO:0047322 F [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity
GO:0048511 P rhythmic process
GO:0050405 F [acetyl-CoA carboxylase] kinase activity
GO:0055089 P fatty acid homeostasis
GO:0071380 P cellular response to prostaglandin E stimulus
GO:1901796 P regulation of signal transduction by p53 class mediator
GO:2000505 P energy homeostasis
FPKM:5.55 TPM:4.38
18 A_BomoMG_comp101467_c0_seq1
326bp
FPKM:3.33 TPM:2.63
19 A_BomoMG_comp101492_c0_seq1
288bp
 PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_G_[Bombyx_mori]
FPKM:17.46 TPM:13.79
20 A_BomoMG_comp101679_c0_seq1
284bp
FPKM:1.36 TPM:1.08
21 A_BomoMG_comp101694_c0_seq1
1782bp
 PREDICTED:_dolichyl_pyrophosphate_Man9GlcNAc2_alpha-1,3-glucosyltransferase_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006490 P oligosaccharide-lipid intermediate biosynthetic process
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0042281 F dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
FPKM:5.90 TPM:4.66
22 A_BomoMG_comp101841_c0_seq1
693bp
FPKM:7.89 TPM:6.23
23 A_BomoMG_comp101876_c0_seq1
516bp
 gp242_[Bacillus_phage_G]
FPKM:7.75 TPM:6.13
24 A_BomoMG_comp101938_c0_seq1
499bp
 MULTISPECIES:_hypothetical_protein_[Oscillatoriophycideae]
FPKM:11.93 TPM:9.43
25 A_BomoMG_comp101971_c0_seq1
700bp
 PREDICTED:_rho_GDP-dissociation_inhibitor_2_isoform_X3_[Myotis_brandtii]
FPKM:5.24 TPM:4.14
26 A_BomoMG_comp101983_c0_seq1
482bp
FPKM:7.77 TPM:6.14
27 A_BomoMG_comp102287_c0_seq1
372bp
 PREDICTED:_paired_amphipathic_helix_protein_Sin3a_[Bombyx_mori]
FPKM:15.22 TPM:12.02
28 A_BomoMG_comp102305_c0_seq1
323bp
FPKM:9.74 TPM:7.69
29 A_BomoMG_comp102322_c0_seq1
1725bp
 neuropeptide_receptor_A4_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0004983 F neuropeptide Y receptor activity
GO:0004995 F tachykinin receptor activity
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007194 P negative regulation of adenylate cyclase activity
GO:0007217 P tachykinin receptor signaling pathway
GO:0007218 P neuropeptide signaling pathway
GO:0007610 P behavior
GO:0008188 F neuropeptide receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030536 P larval feeding behavior
GO:0042263 F neuropeptide F receptor activity
FPKM:7.36 TPM:5.81
30 A_BomoMG_comp102326_c0_seq1
301bp
FPKM:8.72 TPM:6.89
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