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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
31 A_BomoMG_comp102341_c0_seq1
492bp
 PREDICTED:_macrophage_erythroblast_attacher_isoform_X2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005826 C actomyosin contractile ring
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007010 P cytoskeleton organization
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0033033 P negative regulation of myeloid cell apoptotic process
GO:0043249 P erythrocyte maturation
GO:0048821 P erythrocyte development
GO:0048822 P enucleate erythrocyte development
GO:0051301 P cell division
FPKM:6.25 TPM:4.94
32 A_BomoMG_comp102353_c0_seq1
320bp
FPKM:9.05 TPM:7.15
33 A_BomoMG_comp1024875_c0_seq1
228bp
 PREDICTED:_uncharacterized_protein_LOC101744379_isoform_X5_[Bombyx_mori]
FPKM:1.38 TPM:1.09
34 A_BomoMG_comp102515_c0_seq1
514bp
FPKM:10.33 TPM:8.16
35 A_BomoMG_comp102527_c0_seq1
817bp
FPKM:5.93 TPM:4.68
36 A_BomoMG_comp102593_c0_seq1
696bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_20_[Papilio_machaon]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:9.60 TPM:7.59
37 A_BomoMG_comp102615_c0_seq1
230bp
 DNA-directed_RNA_polymerase_subunit_M_[Roseburia_intestinalis]
FPKM:8.97 TPM:7.09
38 A_BomoMG_comp1026963_c0_seq1
216bp
FPKM:1.61 TPM:1.27
39 A_BomoMG_comp102704_c0_seq1
291bp
FPKM:5.70 TPM:4.50
40 A_BomoMG_comp102710_c0_seq1
511bp
FPKM:7.76 TPM:6.13
41 A_BomoMG_comp102718_c0_seq1
942bp
 PREDICTED:_disintegrin_and_metalloproteinase_domain-containing_protein_10_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0006468 P protein phosphorylation
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0007162 P negative regulation of cell adhesion
GO:0007219 P Notch signaling pathway
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019901 F protein kinase binding
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
FPKM:6.63 TPM:5.24
42 A_BomoMG_comp102777_c0_seq1
1064bp
 PREDICTED:_prostaglandin_reductase_1-like_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0006693 P prostaglandin metabolic process
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0032440 F 2-alkenal reductase [NAD(P)+] activity
GO:0036132 F 13-prostaglandin reductase activity
GO:0047522 F 15-oxoprostaglandin 13-oxidase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:7.49 TPM:5.91
43 A_BomoMG_comp102801_c0_seq1
218bp
FPKM:5.22 TPM:4.12
44 A_BomoMG_comp102927_c0_seq1
1275bp
 PREDICTED:_UPF0160_protein_MYG1,_mitochondrial_isoform_X2_[Amyelois_transitella]
FPKM:8.25 TPM:6.52
45 A_BomoMG_comp102957_c0_seq1
1233bp
 PREDICTED:_mitochondrial_ubiquitin_ligase_activator_of_nfkb_1-A_[Papilio_xuthus]
GO:0000266 P mitochondrial fission
GO:0004842 F ubiquitin-protein transferase activity
GO:0004871 F obsolete signal transducer activity
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0007005 P mitochondrion organization
GO:0007165 P signal transduction
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030308 P negative regulation of cell growth
GO:0031307 C integral component of mitochondrial outer membrane
GO:0042802 F identical protein binding
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0046872 F metal ion binding
GO:0051646 P mitochondrion localization
FPKM:7.90 TPM:6.24
46 A_BomoMG_comp102963_c0_seq1
227bp
FPKM:4.65 TPM:3.67
47 A_BomoMG_comp102965_c0_seq1
657bp
FPKM:8.37 TPM:6.62
48 A_BomoMG_comp102976_c0_seq1
294bp
FPKM:11.67 TPM:9.22
49 A_BomoMG_comp103054_c0_seq1
746bp
FPKM:6.14 TPM:4.85
50 A_BomoMG_comp103077_c0_seq1
204bp
 putative_c6_transcription_[Diaporthe_ampelina]
FPKM:1.28 TPM:1.01
51 A_BomoMG_comp1030787_c0_seq1
225bp
FPKM:0.95 TPM:0.75
52 A_BomoMG_comp103088_c0_seq1
1925bp
FPKM:7.05 TPM:5.57
53 A_BomoMG_comp103188_c0_seq1
1205bp
FPKM:5.33 TPM:4.21
54 A_BomoMG_comp103205_c0_seq1
263bp
FPKM:8.69 TPM:6.86
55 A_BomoMG_comp103271_c0_seq1
1448bp
 PREDICTED:_developmentally-regulated_GTP-binding_protein_2_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0043231 C intracellular membrane-bounded organelle
FPKM:8.04 TPM:6.35
56 A_BomoMG_comp103273_c0_seq1
441bp
 PREDICTED:_cytochrome_c_oxidase_assembly_factor_6_homolog_[Amyelois_transitella]
GO:0004129 F cytochrome-c oxidase activity
GO:0005507 F copper ion binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0005886 C plasma membrane
GO:0008535 P respiratory chain complex IV assembly
GO:0042774 P plasma membrane ATP synthesis coupled electron transport
GO:0044822 F RNA binding
GO:1902600 P proton transmembrane transport
FPKM:10.75 TPM:8.49
57 A_BomoMG_comp103375_c0_seq1
380bp
FPKM:7.51 TPM:5.93
58 A_BomoMG_comp103479_c0_seq1
296bp
FPKM:4.25 TPM:3.36
59 A_BomoMG_comp103574_c0_seq1
272bp
 PREDICTED:_ADAMTS-like_protein_1_[Bombyx_mori]
FPKM:8.66 TPM:6.84
60 A_BomoMG_comp103766_c0_seq1
1807bp
FPKM:5.09 TPM:4.02
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