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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
931 A_BomoFB_comp10214_c0_seq2
201bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:5.33 TPM:5.85
932 A_BomoFB_comp102161_c0_seq1
259bp
 H0117D06-OSIGBa0088B06.5_[Oryza_sativa_Indica_Group]
FPKM:0.00 TPM:0.00
933 A_BomoFB_comp102166_c0_seq1
253bp
FPKM:1.47 TPM:1.61
934 A_BomoFB_comp10216_c0_seq1
993bp
 uncharacterized_protein_LOC692518_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016717 F oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0017105 F acyl-CoA delta11-desaturase activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:25.60 TPM:28.05
935 A_BomoFB_comp10216_c1_seq1
3014bp
 uncharacterized_protein_LOC692518_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016717 F oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0017105 F acyl-CoA delta11-desaturase activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:9.49 TPM:10.40
936 A_BomoFB_comp10216_c1_seq2
1517bp
 uncharacterized_protein_LOC692518_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016717 F oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0017105 F acyl-CoA delta11-desaturase activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.00 TPM:0.00
937 A_BomoFB_comp10216_c2_seq1
624bp
 ubiquitin_conjugating_enzyme_isoform_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0044257 P cellular protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070062 C extracellular exosome
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
FPKM:8.18 TPM:8.96
938 A_BomoFB_comp10216_c2_seq2
1624bp
 ubiquitin_conjugating_enzyme_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0044257 P cellular protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070062 C extracellular exosome
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
FPKM:15.32 TPM:16.78
939 A_BomoFB_comp10217_c0_seq1
262bp
FPKM:7.93 TPM:8.69
940 A_BomoFB_comp10217_c1_seq1
1480bp
 SOCS2-12_protein_[Bombyx_mori]
GO:0001558 P regulation of cell growth
GO:0004860 F protein kinase inhibitor activity
GO:0005131 F growth hormone receptor binding
GO:0005159 F insulin-like growth factor receptor binding
GO:0005737 C cytoplasm
GO:0006469 P negative regulation of protein kinase activity
GO:0007595 P lactation
GO:0008269 F JAK pathway signal transduction adaptor activity
GO:0009968 P negative regulation of signal transduction
GO:0016567 P protein ubiquitination
GO:0019221 P cytokine-mediated signaling pathway
GO:0032355 P response to estradiol
GO:0032870 P cellular response to hormone stimulus
GO:0035556 P intracellular signal transduction
GO:0040008 P regulation of growth
GO:0040014 P regulation of multicellular organism growth
GO:0040015 P negative regulation of multicellular organism growth
GO:0045666 P positive regulation of neuron differentiation
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0046627 P negative regulation of insulin receptor signaling pathway
GO:0060396 P growth hormone receptor signaling pathway
GO:0060749 P mammary gland alveolus development
FPKM:3.95 TPM:4.33
941 A_BomoFB_comp10217_c1_seq2
1595bp
 SOCS2-12_protein_[Bombyx_mori]
GO:0001558 P regulation of cell growth
GO:0003674 F molecular_function
GO:0004860 F protein kinase inhibitor activity
GO:0005159 F insulin-like growth factor receptor binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0006469 P negative regulation of protein kinase activity
GO:0007568 P aging
GO:0008269 F JAK pathway signal transduction adaptor activity
GO:0009968 P negative regulation of signal transduction
GO:0016567 P protein ubiquitination
GO:0019221 P cytokine-mediated signaling pathway
GO:0035556 P intracellular signal transduction
GO:0040008 P regulation of growth
GO:0043434 P response to peptide hormone
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0046627 P negative regulation of insulin receptor signaling pathway
FPKM:2.56 TPM:2.81
942 A_BomoFB_comp10218_c0_seq1
1145bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:3.10 TPM:3.40
943 A_BomoFB_comp10219_c0_seq1
3011bp
 hypothetical_protein_KGM_18008_[Danaus_plexippus]
FPKM:6.60 TPM:7.23
944 A_BomoFB_comp10220_c0_seq1
1175bp
 PREDICTED:_muscle_segmentation_homeobox-like_[Papilio_machaon]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007389 P pattern specification process
GO:0007398 P ectoderm development
GO:0007400 P neuroblast fate determination
GO:0007417 P central nervous system development
GO:0007419 P ventral cord development
GO:0007420 P brain development
GO:0007450 P dorsal/ventral pattern formation, imaginal disc
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007485 P imaginal disc-derived male genitalia development
GO:0007517 P muscle organ development
GO:0009953 P dorsal/ventral pattern formation
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0021782 P glial cell development
GO:0035222 P wing disc pattern formation
GO:0035309 P wing and notum subfield formation
GO:0042659 P regulation of cell fate specification
GO:0043565 F sequence-specific DNA binding
FPKM:3.61 TPM:3.96
945 A_BomoFB_comp1022116_c0_seq1
223bp
 PREDICTED:_alsin_[Bombyx_mori]
FPKM:2.28 TPM:2.50
946 A_BomoFB_comp10221_c0_seq1
1204bp
 PREDICTED:_eukaryotic_translation_initiation_factor_2_alpha_subunit_isoform_X1_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000049 F tRNA binding
GO:0001677 P formation of translation initiation ternary complex
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005525 F GTP binding
GO:0005829 C cytosol
GO:0005840 C ribosome
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0005875 C microtubule associated complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0007052 P mitotic spindle organization
GO:0033290 C eukaryotic 48S preinitiation complex
GO:0043022 F ribosome binding
GO:0043614 C multi-eIF complex
FPKM:27.12 TPM:29.72
947 A_BomoFB_comp102228_c0_seq1
548bp
FPKM:3.42 TPM:3.75
948 A_BomoFB_comp10222_c0_seq1
1671bp
 PREDICTED:_transmembrane_protein_135-like_isoform_X2_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:3.21 TPM:3.52
949 A_BomoFB_comp10223_c0_seq1
1443bp
 Uncharacterized_protein_OBRU01_02090_[Operophtera_brumata]
FPKM:2.90 TPM:3.18
950 A_BomoFB_comp10223_c0_seq2
2210bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:3.18 TPM:3.48
951 A_BomoFB_comp10224_c0_seq1
775bp
 PREDICTED:_uncharacterized_protein_LOC103307937_[Acyrthosiphon_pisum]
FPKM:2.20 TPM:2.41
952 A_BomoFB_comp10225_c0_seq1
11718bp
 PREDICTED:_cubilin-like_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006898 P receptor-mediated endocytosis
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0031419 F cobalamin binding
GO:0046872 F metal ion binding
FPKM:20.00 TPM:21.91
953 A_BomoFB_comp10225_c1_seq1
650bp
FPKM:10.46 TPM:11.46
954 A_BomoFB_comp102265_c0_seq1
875bp
FPKM:2.51 TPM:2.75
955 A_BomoFB_comp10226_c0_seq1
4782bp
 PREDICTED:_uncharacterized_protein_LOC101745010_[Bombyx_mori]
FPKM:3.11 TPM:3.41
956 A_BomoFB_comp10227_c0_seq1
1277bp
FPKM:23.93 TPM:26.22
957 A_BomoFB_comp10227_c0_seq2
1863bp
FPKM:13.10 TPM:14.35
958 A_BomoFB_comp10228_c0_seq1
761bp
 PREDICTED:_glutathione_S-transferase_D7-like_[Bombyx_mori]
FPKM:2.52 TPM:2.76
959 A_BomoFB_comp10228_c0_seq2
538bp
FPKM:0.33 TPM:0.37
960 A_BomoFB_comp10228_c0_seq3
308bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_exportin-6-like_[Papilio_machaon]
FPKM:5.17 TPM:5.66
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