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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
721 A_BomoFB_comp10169_c0_seq2
1728bp
 PREDICTED:_sperm-associated_antigen_7_homolog_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0008150 P biological_process
FPKM:2.44 TPM:2.67
722 A_BomoFB_comp101703_c0_seq1
3602bp
 Uncharacterized_protein_OBRU01_14946_[Operophtera_brumata]
FPKM:2.25 TPM:2.47
723 A_BomoFB_comp10170_c0_seq1
921bp
 PREDICTED:_uncharacterized_protein_LOC101744165_[Bombyx_mori]
FPKM:2.28 TPM:2.50
724 A_BomoFB_comp10171_c0_seq1
1115bp
 attacin_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0042742 P defense response to bacterium
GO:0045087 P innate immune response
FPKM:11.33 TPM:12.42
725 A_BomoFB_comp10171_c0_seq2
918bp
 attacin_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0042742 P defense response to bacterium
GO:0045087 P innate immune response
FPKM:40.88 TPM:44.80
726 A_BomoFB_comp10172_c0_seq1
1145bp
FPKM:22.24 TPM:24.36
727 A_BomoFB_comp10173_c0_seq1
1017bp
 PREDICTED:_glyoxylate_reductase/hydroxypyruvate_reductase-like_[Plutella_xylostella]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007588 P excretion
GO:0008152 P metabolic process
GO:0008465 F glycerate dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016618 F hydroxypyruvate reductase activity
GO:0030267 F glyoxylate reductase (NADP+) activity
GO:0031406 F carboxylic acid binding
GO:0042803 F protein homodimerization activity
GO:0043648 P dicarboxylic acid metabolic process
GO:0050661 F NADP binding
GO:0051259 P protein complex oligomerization
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070402 F NADPH binding
FPKM:2.93 TPM:3.21
728 A_BomoFB_comp101740_c0_seq1
1048bp
 putative_ceramidase_[Operophtera_brumata]
GO:0005576 C extracellular region
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0016787 F hydrolase activity
GO:0017040 F N-acylsphingosine amidohydrolase activity
FPKM:3.89 TPM:4.26
729 A_BomoFB_comp10174_c0_seq1
887bp
 PREDICTED:_splicing_factor_1_isoform_X1_[Papilio_machaon]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
FPKM:3.45 TPM:3.78
730 A_BomoFB_comp10174_c0_seq2
1036bp
 PREDICTED:_splicing_factor_1_isoform_X2_[Papilio_machaon]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
FPKM:0.62 TPM:0.68
731 A_BomoFB_comp10174_c0_seq3
431bp
 PREDICTED:_splicing_factor_1_[Bombyx_mori]
FPKM:1.75 TPM:1.92
732 A_BomoFB_comp10174_c0_seq4
963bp
 PREDICTED:_splicing_factor_1_[Bombyx_mori]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
FPKM:7.47 TPM:8.18
733 A_BomoFB_comp10174_c0_seq5
408bp
 PREDICTED:_splicing_factor_1_[Bombyx_mori]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
FPKM:2.96 TPM:3.24
734 A_BomoFB_comp10175_c0_seq1
500bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:0.50 TPM:0.55
735 A_BomoFB_comp10175_c0_seq2
211bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:4.29 TPM:4.70
736 A_BomoFB_comp10175_c0_seq3
545bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:9.31 TPM:10.20
737 A_BomoFB_comp10175_c0_seq4
256bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
738 A_BomoFB_comp10176_c0_seq1
877bp
 PREDICTED:_uncharacterized_protein_LOC105392943_[Plutella_xylostella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.96 TPM:2.14
739 A_BomoFB_comp10176_c1_seq1
991bp
 PREDICTED:_uncharacterized_protein_LOC105841548_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.64 TPM:1.79
740 A_BomoFB_comp10176_c1_seq2
247bp
FPKM:4.49 TPM:4.92
741 A_BomoFB_comp10177_c0_seq1
208bp
FPKM:3.04 TPM:3.33
742 A_BomoFB_comp101787_c0_seq1
833bp
FPKM:1.75 TPM:1.92
743 A_BomoFB_comp10178_c0_seq1
1097bp
 PREDICTED:_probable_tRNA_(uracil-O(2)-)-methyltransferase,_partial_[Bombyx_mori]
FPKM:10.10 TPM:11.06
744 A_BomoFB_comp10178_c0_seq2
16825bp
 PREDICTED:_kettin_protein_isoform_X1_[Bombyx_mori]
GO:0000794 C condensed nuclear chromosome
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005863 C striated muscle myosin thick filament
GO:0005875 C microtubule associated complex
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007520 P myoblast fusion
GO:0007522 P visceral muscle development
GO:0007525 P somatic muscle development
GO:0008307 F structural constituent of muscle
GO:0016203 P muscle attachment
GO:0019233 P sensory perception of pain
GO:0030017 C sarcomere
GO:0030018 C Z disc
GO:0031674 C I band
GO:0035206 P regulation of hemocyte proliferation
GO:0040011 P locomotion
GO:0045214 P sarcomere organization
GO:0051301 P cell division
FPKM:29.34 TPM:32.15
745 A_BomoFB_comp10179_c0_seq1
486bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:5.20 TPM:5.69
746 A_BomoFB_comp10179_c0_seq2
423bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
747 A_BomoFB_comp1017_c0_seq1
413bp
 PREDICTED:_type_I_inositol_3,4-bisphosphate_4-phosphatase-like_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016316 F phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity
GO:0016787 F hydrolase activity
GO:0034597 F phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
FPKM:0.94 TPM:1.03
748 A_BomoFB_comp10180_c0_seq1
1040bp
 PREDICTED:_transmembrane_protein_179_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:8.67 TPM:9.50
749 A_BomoFB_comp10180_c0_seq2
1014bp
 PREDICTED:_transmembrane_protein_179_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.86 TPM:0.94
750 A_BomoFB_comp10180_c1_seq1
391bp
 PREDICTED:_uncharacterized_protein_LOC105842607_[Bombyx_mori]
FPKM:8.34 TPM:9.14
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