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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
661 A_BomoFB_comp10148_c0_seq1
480bp
 PREDICTED:_uncharacterized_protein_LOC106718363_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004533 F exoribonuclease H activity
GO:0005198 F structural molecule activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0008289 F lipid binding
GO:0015074 P DNA integration
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0019028 C viral capsid
GO:0019076 P viral release from host cell
GO:0020002 C host cell plasma membrane
GO:0030430 C host cell cytoplasm
GO:0033644 C host cell membrane
GO:0039526 P modulation by virus of host apoptotic process
GO:0039651 P induction by virus of host cysteine-type endopeptidase activity involved in apoptotic process
GO:0039657 P suppression by virus of host gene expression
GO:0042025 C host cell nucleus
GO:0044174 C host cell endosome
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0055036 C virion membrane
GO:0071897 P DNA biosynthetic process
GO:0072494 C host multivesicular body
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
FPKM:3.11 TPM:3.40
662 A_BomoFB_comp10148_c1_seq1
2712bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X2_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.81 TPM:1.98
663 A_BomoFB_comp10148_c1_seq2
2786bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X3_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.87 TPM:0.95
664 A_BomoFB_comp10148_c1_seq3
862bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.00 TPM:0.00
665 A_BomoFB_comp101491_c0_seq1
289bp
 PREDICTED:_protein_MON2_homolog_[Bombyx_mori]
FPKM:6.55 TPM:7.18
666 A_BomoFB_comp10149_c0_seq1
361bp
 PREDICTED:_uncharacterized_protein_LOC105841408_[Bombyx_mori]
FPKM:5.78 TPM:6.34
667 A_BomoFB_comp10150_c0_seq1
401bp
FPKM:1.49 TPM:1.64
668 A_BomoFB_comp10150_c1_seq1
926bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.22 TPM:2.43
669 A_BomoFB_comp10150_c1_seq2
898bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:3.92 TPM:4.30
670 A_BomoFB_comp101514_c0_seq1
901bp
FPKM:2.19 TPM:2.40
671 A_BomoFB_comp10151_c0_seq1
1436bp
 PREDICTED:_ras-related_protein_Rab-35_[Plutella_xylostella]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0000910 P cytokinesis
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008104 P protein localization
GO:0008152 P metabolic process
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0019003 F GDP binding
GO:0019882 P antigen processing and presentation
GO:0030136 C clathrin-coated vesicle
GO:0031175 P neuron projection development
GO:0031253 C cell projection membrane
GO:0031410 C cytoplasmic vesicle
GO:0032456 P endocytic recycling
GO:0036010 P protein localization to endosome
GO:0042470 C melanosome
GO:0045171 C intercellular bridge
GO:0045334 C clathrin-coated endocytic vesicle
GO:0048227 P plasma membrane to endosome transport
GO:0070062 C extracellular exosome
GO:1990090 P cellular response to nerve growth factor stimulus
FPKM:8.32 TPM:9.12
672 A_BomoFB_comp101520_c0_seq1
1477bp
 PREDICTED:_Williams-Beuren_syndrome_chromosomal_region_16_protein-like_[Amyelois_transitella]
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0044822 F RNA binding
FPKM:2.77 TPM:3.03
673 A_BomoFB_comp101527_c0_seq1
688bp
 PREDICTED:_multidrug_resistance-associated_protein_1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
FPKM:2.90 TPM:3.18
674 A_BomoFB_comp10152_c0_seq1
534bp
 RNA-dependent_RNA_polymerase_[Nyamanini_nyavirus]
FPKM:1.82 TPM:2.00
675 A_BomoFB_comp10152_c0_seq2
1848bp
 RNA-dependent_RNA_polymerase_[Sierra_Nevada_virus]
GO:0000166 F nucleotide binding
GO:0001172 P transcription, RNA-templated
GO:0003824 F catalytic activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0004482 F mRNA (guanine-N7-)-methyltransferase activity
GO:0005524 F ATP binding
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019012 C virion component
GO:0032259 P methylation
GO:0036265 P RNA (guanine-N7)-methylation
GO:0042025 C host cell nucleus
FPKM:1.09 TPM:1.19
676 A_BomoFB_comp10152_c0_seq3
1312bp
 RNA-dependent_RNA_polymerase_[Midway_nyavirus]
GO:0000166 F nucleotide binding
GO:0001172 P transcription, RNA-templated
GO:0003824 F catalytic activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0004482 F mRNA (guanine-N7-)-methyltransferase activity
GO:0005524 F ATP binding
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0032259 P methylation
GO:0036265 P RNA (guanine-N7)-methylation
FPKM:0.72 TPM:0.78
677 A_BomoFB_comp101536_c0_seq1
588bp
FPKM:2.68 TPM:2.94
678 A_BomoFB_comp10153_c0_seq1
284bp
 PREDICTED:_uncharacterized_protein_LOC105842553_[Bombyx_mori]
FPKM:6.34 TPM:6.94
679 A_BomoFB_comp10154_c0_seq1
1095bp
 glutathione_S-transferase_delta_2_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0008152 P metabolic process
GO:0016740 F transferase activity
FPKM:61.26 TPM:67.12
680 A_BomoFB_comp101557_c0_seq1
426bp
 serine/threonine_protein_kinase_[Bosea_sp._Root483D1]
FPKM:4.47 TPM:4.89
681 A_BomoFB_comp10155_c0_seq1
2450bp
FPKM:7.62 TPM:8.35
682 A_BomoFB_comp101565_c0_seq1
246bp
FPKM:0.80 TPM:0.88
683 A_BomoFB_comp10156_c0_seq1
1342bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.00 TPM:0.00
684 A_BomoFB_comp10156_c0_seq2
440bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.75 TPM:0.82
685 A_BomoFB_comp10156_c0_seq3
1500bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.20 TPM:2.41
686 A_BomoFB_comp101578_c0_seq1
477bp
FPKM:1.66 TPM:1.82
687 A_BomoFB_comp1015793_c0_seq1
241bp
FPKM:0.86 TPM:0.94
688 A_BomoFB_comp10157_c0_seq1
1663bp
 transport_protein_Sec61_gamma_subunit_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006605 P protein targeting
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0015450 F protein-transporting ATPase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045047 P protein targeting to ER
GO:0071806 P protein transmembrane transport
FPKM:28.34 TPM:31.05
689 A_BomoFB_comp10157_c0_seq2
5494bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:10.19 TPM:11.16
690 A_BomoFB_comp10158_c0_seq1
1404bp
FPKM:3.65 TPM:4.00
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