SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10157_c0_seq2
Scaffold_idBomo_Scaf318
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:10.19 TPM:11.16
ORF EntryO_BomoFB12135_complete:A_BomoFB_comp10157_c0_seq2
Sequence
(Nucleotide)
AGCAATTGAAGCCTTGACTTTTTTTTTCACTACTGCAGTTGTACGTTTTTGAGTTGGGGA
CGAGAGCAATTAAATAATTGTCGACGTGAATTAACAATAAAACGATTGTTGAATTATTAA
TTTAATAATGGATCAGATCGCAAAATTCGTCGAGCCTGGCAAGCAATTCGCTAAGGACTC
CATCAGATTAGTGAGAAGATGCACAAAACCTGATAGGAAAGAATTCCAAAAGATTGCCAT
TGCAACAGCCATCGGATTTTGCATCATGGGCTTCATTGGATTCTTTGTAAAGCTGATTCA
TATCCCCATTAATAACATAATTGTCGGCTCATAGATAAATAAGTTAATTTAGACATTAAT
TATAATTAAGGTCCCCCCAAGCATGTGTGTTAGAACATCCCCTCACATATTATATTATTT
ACAACAAACTGTATTGTATAATTTCATAAATAAATAAATTATTTGGTTCTTGTAATTTAG
TCTTATTATTATTCAGTATGTAACGTAAGTTCAAATATGACTTTCCAACTTGCATAGTAC
CATAGTGGAGAATACTATGCATGTTGGGATGTCATACTGTCCAGCATACGAATTTTCTGC
CTTTGCCTGTATATCTAGCATATGGCTCATCTGATGATGAGTGATCAGTCTCTGAACGTC
AGCAATACCAGGGACATAAGCCACTCTGTGTGTAAGTAAATAATGTTTAAGTTTTTATTA
CTTGTGAAGATATTACTGGTTGTAGGGCATCTTGTGAGCCCCCACATACCATCATACTGC
CGAAGCAGTAATGTGTTTCTGTTCGAAGCGTGGGGCAGCTGTTCTATTGTACTATAAAAC
TCTGTCTTTGAAGTCATGTCTCCAAGGTGGGTGCTTTAGTCCATCGGCTTCAGTAATCAC
ACAACACCAGGTCGGCTGCAAGCTCCACTCCACTCATAAAGTGTATTTAAAAAGCTATTA
ATAGTAAGTACAATGAAAGATGTTTAACTTTTTTACTTGTATACTTTTATTGAGGCATAT
GATACAGTTGCTGTCAACAAAAACTCATTAAAGCTGCCATAACCCCTCGAGGTCACTAGA
ACAGGTAGGAAAAAATAATTAATCAACATGTAGTGTAGCTATGTATTATTATTATTACTA
TATTATAAGTTTGACTTTGTTTATAATAATATTAGATGTAGAATTATTATATTTAAAAAT
TATGTTGATTTTTAATATTGTCTAGTTTTTGGGACAAACATTCTTTGTATATAGTCAGCA
ATGACGCACCGTGCGCAAGCGCTACGGGTGGCCTCCGCGCGCGCACTTCACCACCAGTCC
GTAAACTGCCTTGCCGTCGGATACTCGTATGATTTTACCTGCTAACCCGCTTCGCAGTGC
TTGCACATAGTCTTGCTTAACTTTAGCTTATAGTTGAAGTTTGTTTGTTTCCTCTTCCCC
TTCTATGTGTTTGTTCTTAATATAATATTATAAGACAATAAAACTGAAAGTGTTTTTAAA
AACTGTGCGGGTGGTTTAATTTGACTAACACTTCATTGGTGACCTCTCATACAGAACGCA
ATATGAGTGTGGAAAAAACAGTTGCAAGTGGCAGTAGTGACCTTGGTCGTGTGGGTGTAA
GGGTACCACCGTTCTACCCGGATAAACCAGCGCTCTGGTTTGCACAGCTGGAGAGCCAGT
TCCTGTTGTCGAGCATAACCGCTGACTCGACAAAATTTCACTATACCTGCAGCCAGTTGG
ATGAAGCCTACGCCTCGACAGTGGAGGATATCATCACTAATCCTCCAGCCAGTGGGAAGT
ACGAGCGACTAAAGTCGGAGTTGATTAACCGTCTTTCCAAGTCCCGTGAAAAGAAAGTCC
AACAACTCCTGCATCACGAGGAACTCGGTGATAGAAAACCCTCGCAATTCCTGCGACATC
TAAGGGACCTCGCCGGGGCAGACGTACCAGAAGACTTCGTGCGCACCATTTGGGTTAGTC
GTCTACCCTCAAATACCCAAGCTATTGTAGCATCGCAGTGCAACGCCTCGCTCGAAGACG
TGTCGCAGTTGGCAGATAAAGTGCACGACGTAGTATCCAACAGCCCACAAGTAGCAGCAG
TGGGAGTACCCGAGAGCAGTGCCGTTAACGCTCAGATAGCGGAACTCACCCGCCAGGTAC
AGGTACTGTCAACAAAGTTAGACAGGATGTCGCGCTCAAGGCAGAGATCAAACTCCTTCC
ATCGGAACCACACACGCGCTTCCAGGTCCAGGACCAGATCTGACTCAAACTACAGAAAAT
TCCCGTTATGTTGGTACCACTCAAAATTTGGAAATCGGGCTAAGACATGTGTGAAACCTT
GTGATTTTTCGGGAAACGCAGCGGGCATTCGGTAGTAGCGACCACCGACTGTCCAGGTAT
TGGTCGCTTATTCGTTACAGACCAACGTACTAAAATGCAATTTTTAGTGGATACAGGTAG
TGACTTATGTGTATTTCCGAGAAAGTTTTTAAAAGACAACCGTCAAAAAACAAAATATGA
TCTTTGTGCAGCAAACGGTACAATTATTAATACCTACGGCTACGCTCACTTAGTTCTTAA
CCTAGGGTTGCGCCGCGACTTTGCTTGGCGATTTATTGTAGCGGATGTCACAAGGGCTAT
AATAGGCGTTGATTTTTTATCTTTTTATAATTTAATTGTTGATGTTCGCAGGCAACGCTT
AATTGACGCTGAAACTTCACTTGCGACCGCGGCTTCGCTCGATCATTCTCATGAGGACAT
TTCTTCGGTGCGGGTTGTATCAGGTGATTCTGTTTATCATTCTATACTAGCACACTACCC
TGACATCACTCGTCCATCAGGCATACACAGTACATCGAAACATGACACTGTACACTATAT
TCGCACCACACCTGGACCACCGATTGCAAGCACACCACGTAGACTGGCACCGGACAAATT
AAAAATCGCAAAGGCTGAATTTGAGACTATGCTGCAAAATGGTACTTGTCGACCGTCATT
ATCACCATGGTCTTCACCACTACACCTCGCTCCTAAAAAAGATAATGGATGGCGCCCCTG
CGGGGATTATAGGATGCTCAATGCACGCACCATACCAGACCAATACCCCATACGCCATAT
TCATGATTTCAGTCATAGTCTCGCTGGTTGCAAAGTATTTTCATCGTTGGATTTAGTGAG
AGCTTACAATCAGGTGCCCGTCCACCAGGACGATATCGCGAAAACTGCCATCACAACGCC
GTTCGGTCTTTATGAATTCCCATACATGACGTTTGGATTACGTAATGCCGGACAGACGTT
TCAGCGTTTTGTTGATGAAATGCTTCGGGGCCTAGATTTTACGTACGCCTATATCGATGA
TCTTTTAATATTTTCTAAGGATGAAGAGGCTCATAAAAAGCACCTGCACCAACTGTTCTC
CAGGCTTCAAAAATATGGCATGGTTATCAACACAGGAAAGTGTGTGTTCGGTGTCCCAAA
GGTCACATTTTTAGGTTACAGCATTTCTGCTGAGGGCACTAAACCTCTTCCCGCAAAGGT
GGAAGCCATTAAGACTTTCCCTGTTCCAAAAACGGTCAGAGAGCTCAGGCGGTTCCTAGG
GATGGTAAACTTTTACCGCAGATTTATCCCTGAAGCTGCAGTCCATCAAGCGCCTTTGAA
TCTCCTCTTGACCGGCTCCGTCAAAGGGTCTCATCCCGTTAATTTCGGAGACAGGGAACA
TCAAGCCTTTGAAGCCTGCAAAGAAAGCTTATGCAAGGCCGCCATGCTAGCTCATCCGGA
ATGTAACGCAAAGCTCGCGTTAGTTACGGATGCCTCTGATTCAGCAATAGGCGCAGTCCT
CCAGCAGCAAAAGGAAAATTCGTGGCAGGCGTTGGCATTCTTTTCACGGAAATTGAGTTC
CACACAGCTCAAGTATTCCCCTTACGACCGTGAACTCTTAGCCATTTATGAGAGTGTGAA
ATATTTTCGTCACATGGTGGAGGCCCGAGATTTTACCATCTTTACGGACCACAAGCCATT
AACGTATGCTTTTCACTCTCGTAAAGAAAATTGCTCACCACGCCAATTCCGACACCTTGA
TTTTGTCTCACAGTTTACCACAGACATACGCCACATCTCAGGGAAAGACAATGTTGTTGC
CGACACGTTATCCCGAATCGAAGAGATCGTGCAACCCATTGACCTTGAGCAAGTAGCAAA
GGCTCAGCAAGGAGACAACGAGATAAAAGACCTTTTGGAGGATAACTCTTCCCTTTGCCT
CAGAAAGGTGAAGCTACCTGGGTCACGCACAGAATTATACTGTGATGTGGGTGAGACAGT
ACAGAGACCGTTCATTCCGAAGCAGTTTCGACGACAAGTCTTTCAGAGTCTACACTCACT
CAGTCACCCTGGCGCCAATGCGACGGCGAAACTAGTTTCTGAGCGATACGTGTGGCCTGG
TGTTCGAAAAGACTGCAGAGAGTGGGTACGTACCTGCATAGCTTGCCAGCGCTCTAAAAT
TACACGTCACGTTTATTCGCCCATCGCTGCCTTCAAAGTACCACGAGCTAGGTTCACATT
CGTCCATATAGACTTAATCGGTCCATTACCGGTTTCACACGGCAATAAATATTGTCTTAC
AGCCATTGATAGATTTACGCGATGGCCTGAGGCAATACCCTTGCCAGACATAAGTGCCGA
AACTGTTGCAAAAGCACTAATTAGCGGATGGATATCGCGGTTCGGCTGCCCAACGGACAT
TATTTCTGACCGTGGCAGTCAGTTTCAATCGGAGCTGTTCAAAAATTTGTCACAACTATC
CGGATTTCAACACCGACGGACCACTGCTTATCATCCCCAAAGCAATGGACTCGTGGAGCG
ATTCCACAGACAGCTTAAAGCTGCTATTATATGTCATGCCAACGACAGTTGGGTTGAATC
GCTTCCACTTGTTTTGTTAGGGATCCGTAGTGCAGTTAAAGACGACCTCCGAGCATCATC
TGCGGAACTTTTATACGGAGAAGCACTACGTTTACCAGGAGAATTTTTTAACCCCGAAGT
AAGCGATACCGTCAACGTAACAGAGTACATGGCACGACTTCGCAAGTTTGTTAAAGACCT
ACGACCCACACCAGCCTCTCGTCACGGCGGTAAGCGTACATTCGTCTTCAAAGACTTAGC
AACAGCATCCCATATATTTTTGAGGGATGATACATTGGGAGGTTCGCTTAAACAAGCATA
TTCTGGACCTCATGAAGTCTTACAGCGTGGTGACAAAGTGTTTAGGATAATCCTAAACGG
TAAAAACGTCGCAGTATCTATCGACCGCATCAAGCCGGCCTACATACTGCACGATTCAGA
TACCACACATACATACACTCACACAGATTCACCTGATACTACAGACCCAGTTGTCCTCGA
TGCCGATGAAGGTGTCATCAGGAGAACTAGATCAGGGCGTAGAGTGAAGTTTCCGCAATA
TTATCGCCCGTAACCCGGTCTCTGGAGGGGGGTG
(5494 bp)

- SilkBase 1999-2023 -