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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6121 A_BomoFB_comp127049_c0_seq1
560bp
 hypothetical_protein_EUGRSUZ_J02815_[Eucalyptus_grandis]
FPKM:2.16 TPM:2.37
6122 A_BomoFB_comp127056_c0_seq1
397bp
FPKM:0.76 TPM:0.83
6123 A_BomoFB_comp127060_c0_seq1
976bp
 PREDICTED:_midasin_isoform_X1_[Bombyx_mori]
GO:0000027 P ribosomal large subunit assembly
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006461 P protein-containing complex assembly
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0045111 C intermediate filament cytoskeleton
GO:0051082 F unfolded protein binding
FPKM:3.22 TPM:3.53
6124 A_BomoFB_comp127061_c0_seq1
488bp
FPKM:1.60 TPM:1.76
6125 A_BomoFB_comp127066_c0_seq1
435bp
FPKM:1.72 TPM:1.89
6126 A_BomoFB_comp127073_c0_seq1
858bp
 PREDICTED:_zinc_finger_protein_432_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.77 TPM:1.94
6127 A_BomoFB_comp127080_c0_seq1
221bp
FPKM:2.36 TPM:2.59
6128 A_BomoFB_comp127098_c0_seq1
297bp
FPKM:2.35 TPM:2.58
6129 A_BomoFB_comp127100_c0_seq1
493bp
 Uncharacterized_protein_OBRU01_04881_[Operophtera_brumata]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
FPKM:2.98 TPM:3.26
6130 A_BomoFB_comp127103_c0_seq1
1487bp
 hypothetical_protein_KGM_02878_[Danaus_plexippus]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0007417 P central nervous system development
GO:0008521 F acetyl-CoA transmembrane transporter activity
GO:0015295 F solute:proton symporter activity
GO:0015876 P acetyl-CoA transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030509 P BMP signaling pathway
GO:0060395 P SMAD protein signal transduction
FPKM:2.21 TPM:2.42
6131 A_BomoFB_comp127105_c0_seq1
611bp
 PREDICTED:_uncharacterized_protein_LOC106720996_[Papilio_machaon]
FPKM:2.66 TPM:2.92
6132 A_BomoFB_comp127106_c0_seq1
272bp
 PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_G_[Bombyx_mori]
FPKM:6.53 TPM:7.15
6133 A_BomoFB_comp127107_c0_seq1
1692bp
FPKM:2.12 TPM:2.33
6134 A_BomoFB_comp127119_c0_seq1
814bp
 PREDICTED:_myb-like_protein_I_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0007030 P Golgi organization
GO:0030054 C cell junction
FPKM:2.06 TPM:2.26
6135 A_BomoFB_comp127128_c0_seq1
487bp
FPKM:3.39 TPM:3.72
6136 A_BomoFB_comp127130_c0_seq1
312bp
FPKM:1.25 TPM:1.37
6137 A_BomoFB_comp127137_c0_seq1
508bp
FPKM:2.34 TPM:2.56
6138 A_BomoFB_comp127143_c0_seq1
1483bp
 PREDICTED:_calcium_uptake_protein_3,_mitochondrial_isoform_X3_[Amyelois_transitella]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
FPKM:1.71 TPM:1.88
6139 A_BomoFB_comp127152_c0_seq1
229bp
 spore_gernimation_protein_KA_[bacterium_MS4]
FPKM:5.16 TPM:5.65
6140 A_BomoFB_comp127172_c0_seq1
848bp
 PREDICTED:_ATP-binding_cassette_sub-family_A_member_3-like_[Bombyx_mori]
FPKM:2.04 TPM:2.24
6141 A_BomoFB_comp127180_c0_seq1
781bp
 PREDICTED:_E3_ubiquitin-protein_ligase_NRDP1_isoform_X1_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005128 F erythropoietin receptor binding
GO:0005135 F interleukin-3 receptor binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008285 P negative regulation of cell population proliferation
GO:0010468 P regulation of gene expression
GO:0010498 P proteasomal protein catabolic process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0016881 F acid-amino acid ligase activity
GO:0017160 F small GTPase binding
GO:0030336 P negative regulation of cell migration
GO:0031386 F protein tag
GO:0043408 P regulation of MAPK cascade
GO:0045619 P regulation of lymphocyte differentiation
GO:0045637 P regulation of myeloid cell differentiation
GO:0046872 F metal ion binding
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0051865 P protein autoubiquitination
GO:0051896 P regulation of protein kinase B signaling
GO:0061630 F ubiquitin protein ligase activity
GO:0097191 P extrinsic apoptotic signaling pathway
GO:2000114 P regulation of establishment of cell polarity
GO:2000377 P regulation of reactive oxygen species metabolic process
GO:2000379 P positive regulation of reactive oxygen species metabolic process
FPKM:2.81 TPM:3.08
6142 A_BomoFB_comp127188_c0_seq1
1212bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_Dbp45A_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
FPKM:2.00 TPM:2.20
6143 A_BomoFB_comp127193_c0_seq1
418bp
 PREDICTED:_nuclear_pore_complex_protein_Nup98-Nup96_isoform_X3_[Bombyx_mori]
FPKM:3.69 TPM:4.05
6144 A_BomoFB_comp127200_c0_seq1
654bp
 hypothetical_protein_RR46_10186_[Papilio_xuthus]
FPKM:2.88 TPM:3.16
6145 A_BomoFB_comp127210_c0_seq1
651bp
 PREDICTED:_voltage-dependent_calcium_channel_subunit_alpha-2/delta-3_[Bombyx_mori]
FPKM:3.13 TPM:3.43
6146 A_BomoFB_comp127214_c0_seq1
1917bp
 leucine-rich_repeat_G_protein-coupled_receptor_precursor_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0004964 F luteinizing hormone receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007189 P adenylate cyclase-activating G protein-coupled receptor signaling pathway
GO:0007190 P activation of adenylate cyclase activity
GO:0007200 P phospholipase C-activating G protein-coupled receptor signaling pathway
GO:0008528 F G protein-coupled peptide receptor activity
GO:0009755 P hormone-mediated signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016500 F protein-hormone receptor activity
GO:0022602 P ovulation cycle process
GO:0042700 P luteinizing hormone signaling pathway
GO:0043950 P positive regulation of cAMP-mediated signaling
GO:0046546 P development of primary male sexual characteristics
FPKM:2.32 TPM:2.54
6147 A_BomoFB_comp127215_c0_seq1
321bp
FPKM:1.17 TPM:1.29
6148 A_BomoFB_comp127223_c0_seq1
569bp
 PREDICTED:_SAGA-associated_factor_29_homolog_[Papilio_xuthus]
FPKM:3.38 TPM:3.70
6149 A_BomoFB_comp127224_c0_seq1
475bp
FPKM:2.79 TPM:3.06
6150 A_BomoFB_comp127227_c0_seq1
1522bp
 PREDICTED:_uncharacterized_protein_LOC101739757_isoform_X1_[Bombyx_mori]
FPKM:1.78 TPM:1.95
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