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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5911 A_BomoFB_comp121586_c0_seq1
1424bp
 PREDICTED:_girdin_[Papilio_machaon]
GO:0001932 P regulation of protein phosphorylation
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0007399 P nervous system development
GO:0008017 F microtubule binding
GO:0010975 P regulation of neuron projection development
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0031410 C cytoplasmic vesicle
GO:0031929 P TOR signaling
GO:0032148 P activation of protein kinase B activity
GO:0032956 P regulation of actin cytoskeleton organization
GO:0035091 F phosphatidylinositol binding
GO:0042127 P regulation of cell population proliferation
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0043422 F protein kinase B binding
GO:0061024 P membrane organization
FPKM:2.06 TPM:2.25
5912 A_BomoFB_comp121597_c0_seq1
791bp
FPKM:1.61 TPM:1.76
5913 A_BomoFB_comp121607_c0_seq1
727bp
FPKM:2.99 TPM:3.28
5914 A_BomoFB_comp121618_c0_seq1
442bp
 PREDICTED:_dedicator_of_cytokinesis_protein_7_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005622 C intracellular anatomical structure
GO:0005925 C focal adhesion
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0008180 C COP9 signalosome
GO:0022027 P interkinetic nuclear migration
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0030426 C growth cone
GO:0031175 P neuron projection development
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0045178 C basal part of cell
GO:0045200 P establishment of neuroblast polarity
GO:0048365 F small GTPase binding
GO:0050767 P regulation of neurogenesis
GO:0090630 P activation of GTPase activity
GO:1904754 P positive regulation of vascular associated smooth muscle cell migration
FPKM:5.03 TPM:5.51
5915 A_BomoFB_comp121628_c0_seq1
476bp
 PREDICTED:_putative_leucine-rich_repeat-containing_protein_DDB_G0290503_isoform_X2_[Bombyx_mori]
FPKM:2.78 TPM:3.05
5916 A_BomoFB_comp121643_c0_seq1
201bp
FPKM:12.45 TPM:13.64
5917 A_BomoFB_comp121655_c0_seq1
1943bp
 PREDICTED:_zinc_finger_protein_677-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048863 P stem cell differentiation
FPKM:2.75 TPM:3.01
5918 A_BomoFB_comp121666_c0_seq1
1989bp
 PREDICTED:_armadillo_repeat-containing_protein_6_homolog_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:2.37 TPM:2.60
5919 A_BomoFB_comp121676_c0_seq1
969bp
FPKM:2.69 TPM:2.95
5920 A_BomoFB_comp121688_c0_seq1
1317bp
 PREDICTED:_inositol_polyphosphate_1-phosphatase_[Amyelois_transitella]
GO:0000287 F magnesium ion binding
GO:0004441 F inositol-1,4-bisphosphate 1-phosphatase activity
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0016787 F hydrolase activity
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0046855 P inositol phosphate dephosphorylation
GO:0046872 F metal ion binding
FPKM:2.20 TPM:2.41
5921 A_BomoFB_comp121690_c0_seq1
1333bp
 PREDICTED:_C2_domain-containing_protein_5_isoform_X2_[Amyelois_transitella]
GO:0001726 C ruffle
GO:0005509 F calcium ion binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006810 P transport
GO:0006906 P vesicle fusion
GO:0008289 F lipid binding
GO:0010828 P positive regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031340 P positive regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0032587 C ruffle membrane
GO:0032869 P cellular response to insulin stimulus
GO:0038028 P insulin receptor signaling pathway via phosphatidylinositol 3-kinase
GO:0042995 C cell projection
GO:0065002 P intracellular protein transmembrane transport
GO:0072659 P protein localization to plasma membrane
GO:0090314 P positive regulation of protein targeting to membrane
GO:2001275 P obsolete positive regulation of glucose import in response to insulin stimulus
FPKM:3.16 TPM:3.47
5922 A_BomoFB_comp1216_c0_seq1
215bp
FPKM:6.61 TPM:7.24
5923 A_BomoFB_comp121700_c0_seq1
1168bp
 PREDICTED:_uncharacterized_protein_CG4449_[Plutella_xylostella]
GO:0001816 P cytokine production
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016925 P protein sumoylation
GO:0031386 F protein tag
GO:0045944 P positive regulation of transcription by RNA polymerase II
FPKM:2.76 TPM:3.02
5924 A_BomoFB_comp121703_c0_seq1
801bp
 PREDICTED:_protein_CASC3_isoform_X3_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006417 P regulation of translation
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0016070 P RNA metabolic process
GO:0016607 C nuclear speck
GO:0035145 C exon-exon junction complex
GO:0048471 C perinuclear region of cytoplasm
GO:0051028 P mRNA transport
FPKM:2.64 TPM:2.89
5925 A_BomoFB_comp121710_c0_seq1
1599bp
 PREDICTED:_coronin-2B-like_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030036 P actin cytoskeleton organization
GO:0051015 F actin filament binding
FPKM:2.07 TPM:2.27
5926 A_BomoFB_comp121712_c0_seq1
1650bp
 antennal_esterase_CXE11_[Spodoptera_littoralis]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
FPKM:2.48 TPM:2.72
5927 A_BomoFB_comp121728_c0_seq1
518bp
 PREDICTED:_uncharacterized_protein_LOC106713458_[Papilio_machaon]
FPKM:3.57 TPM:3.91
5928 A_BomoFB_comp121744_c0_seq1
601bp
 olfactory_receptor_[Bombyx_mori]
FPKM:2.73 TPM:2.99
5929 A_BomoFB_comp121770_c0_seq1
542bp
FPKM:2.42 TPM:2.65
5930 A_BomoFB_comp121775_c0_seq1
488bp
 PREDICTED:_protein_kinase_C_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
FPKM:3.74 TPM:4.10
5931 A_BomoFB_comp121801_c0_seq1
1382bp
 death_related_ced-3/Nedd2-like_protein_[Bombyx_mori]
GO:0002376 P immune system process
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008656 F cysteine-type endopeptidase activator activity involved in apoptotic process
GO:0016787 F hydrolase activity
GO:0045087 P innate immune response
GO:0050829 P defense response to Gram-negative bacterium
FPKM:2.85 TPM:3.13
5932 A_BomoFB_comp121816_c0_seq1
842bp
 PREDICTED:_multidrug_resistance-associated_protein_1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0015722 P canalicular bile acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:3.46 TPM:3.79
5933 A_BomoFB_comp121825_c0_seq1
673bp
FPKM:3.77 TPM:4.13
5934 A_BomoFB_comp121873_c0_seq1
499bp
FPKM:1.89 TPM:2.07
5935 A_BomoFB_comp121886_c0_seq1
1841bp
 scavenger_receptor_type_C_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016020 C membrane
FPKM:2.19 TPM:2.40
5936 A_BomoFB_comp121916_c0_seq1
1023bp
FPKM:2.78 TPM:3.05
5937 A_BomoFB_comp121952_c0_seq1
247bp
FPKM:9.53 TPM:10.44
5938 A_BomoFB_comp121959_c0_seq1
568bp
 PREDICTED:_uncharacterized_protein_LOC105842553_[Bombyx_mori]
FPKM:1.97 TPM:2.16
5939 A_BomoFB_comp12197_c0_seq1
1337bp
 peroxiredoxin_[Bombyx_mori]
GO:0000302 P response to reactive oxygen species
GO:0001016 F RNA polymerase III transcription regulatory region sequence-specific DNA binding
GO:0004601 F peroxidase activity
GO:0005102 F signaling receptor binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005777 C peroxisome
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0006915 P apoptotic process
GO:0006954 P inflammatory response
GO:0006979 P response to oxidative stress
GO:0008379 F thioredoxin peroxidase activity
GO:0016209 F antioxidant activity
GO:0016480 P negative regulation of transcription by RNA polymerase III
GO:0016491 F oxidoreductase activity
GO:0031410 C cytoplasmic vesicle
GO:0032967 P positive regulation of collagen biosynthetic process
GO:0034614 P cellular response to reactive oxygen species
GO:0042744 P hydrogen peroxide catabolic process
GO:0043027 F cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0046983 F protein dimerization activity
GO:0048471 C perinuclear region of cytoplasm
GO:0051354 P negative regulation of oxidoreductase activity
GO:0051920 F peroxiredoxin activity
GO:0055114 P obsolete oxidation-reduction process
GO:0060785 P regulation of apoptosis involved in tissue homeostasis
GO:0070062 C extracellular exosome
GO:0070995 P NADPH oxidation
GO:0072541 F peroxynitrite reductase activity
GO:0098869 P cellular oxidant detoxification
GO:2001057 P reactive nitrogen species metabolic process
FPKM:119.69 TPM:131.14
5940 A_BomoFB_comp122011_c0_seq1
432bp
FPKM:3.71 TPM:4.06
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