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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
541 A_BomoFB_comp10113_c1_seq5
637bp
FPKM:0.00 TPM:0.00
542 A_BomoFB_comp10113_c1_seq6
2280bp
FPKM:0.00 TPM:0.00
543 A_BomoFB_comp101143_c0_seq1
623bp
 PREDICTED:_zinc_finger_CCCH_domain-containing_protein_18_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0008150 P biological_process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
FPKM:4.32 TPM:4.73
544 A_BomoFB_comp10114_c0_seq1
2580bp
 PREDICTED:_eukaryotic_translation_initiation_factor_2A_[Amyelois_transitella]
GO:0000049 F tRNA binding
GO:0003743 F translation initiation factor activity
GO:0005737 C cytoplasm
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0042255 P ribosome assembly
GO:0043022 F ribosome binding
FPKM:3.90 TPM:4.28
545 A_BomoFB_comp10114_c0_seq2
1177bp
 PREDICTED:_eukaryotic_translation_initiation_factor_2A_[Amyelois_transitella]
GO:0000049 F tRNA binding
GO:0003743 F translation initiation factor activity
GO:0005737 C cytoplasm
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0042255 P ribosome assembly
GO:0043022 F ribosome binding
FPKM:2.80 TPM:3.07
546 A_BomoFB_comp10114_c0_seq3
1806bp
 PREDICTED:_eukaryotic_translation_initiation_factor_2A_[Amyelois_transitella]
GO:0000049 F tRNA binding
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0006468 P protein phosphorylation
GO:0009967 P positive regulation of signal transduction
GO:0032933 P SREBP signaling pathway
GO:0042255 P ribosome assembly
GO:0043022 F ribosome binding
GO:0072562 C blood microparticle
FPKM:1.94 TPM:2.12
547 A_BomoFB_comp10114_c0_seq4
1879bp
 PREDICTED:_eukaryotic_translation_initiation_factor_2A_[Amyelois_transitella]
GO:0000049 F tRNA binding
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0006468 P protein phosphorylation
GO:0009967 P positive regulation of signal transduction
GO:0032933 P SREBP signaling pathway
GO:0042255 P ribosome assembly
GO:0043022 F ribosome binding
GO:0072562 C blood microparticle
FPKM:0.31 TPM:0.34
548 A_BomoFB_comp10115_c0_seq1
3850bp
FPKM:11.41 TPM:12.50
549 A_BomoFB_comp10115_c0_seq2
1697bp
 G_protein_alpha_subunit_Go_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0004871 F obsolete signal transducer activity
GO:0005525 F GTP binding
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007188 P adenylate cyclase-modulating G protein-coupled receptor signaling pathway
GO:0008152 P metabolic process
GO:0019001 F guanyl nucleotide binding
GO:0031683 F G-protein beta/gamma-subunit complex binding
GO:0046872 F metal ion binding
FPKM:22.56 TPM:24.72
550 A_BomoFB_comp101163_c0_seq1
1403bp
 PREDICTED:_uncharacterized_protein_LOC106108224_[Papilio_polytes]
FPKM:2.67 TPM:2.93
551 A_BomoFB_comp10117_c0_seq1
3355bp
 glycerol_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0046167 P glycerol-3-phosphate biosynthetic process
FPKM:15.28 TPM:16.75
552 A_BomoFB_comp10118_c0_seq1
1950bp
 PREDICTED:_inositol-trisphosphate_3-kinase_A_isoform_X1_[Papilio_machaon]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0001932 P regulation of protein phosphorylation
GO:0002262 P myeloid cell homeostasis
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0008440 F inositol-1,4,5-trisphosphate 3-kinase activity
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030217 P T cell differentiation
GO:0032957 P inositol trisphosphate metabolic process
GO:0033030 P negative regulation of neutrophil apoptotic process
GO:0035726 P common myeloid progenitor cell proliferation
GO:0043647 P inositol phosphate metabolic process
GO:0045059 P positive thymic T cell selection
GO:0045061 P thymic T cell selection
GO:0045638 P negative regulation of myeloid cell differentiation
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0046638 P positive regulation of alpha-beta T cell differentiation
GO:0071277 P cellular response to calcium ion
FPKM:7.60 TPM:8.33
553 A_BomoFB_comp10118_c0_seq2
1466bp
 Inositol-trisphosphate_3-kinase_B_[Papilio_machaon]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0001932 P regulation of protein phosphorylation
GO:0002262 P myeloid cell homeostasis
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0008440 F inositol-1,4,5-trisphosphate 3-kinase activity
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030217 P T cell differentiation
GO:0032957 P inositol trisphosphate metabolic process
GO:0033030 P negative regulation of neutrophil apoptotic process
GO:0035726 P common myeloid progenitor cell proliferation
GO:0043647 P inositol phosphate metabolic process
GO:0045059 P positive thymic T cell selection
GO:0045061 P thymic T cell selection
GO:0045638 P negative regulation of myeloid cell differentiation
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0046638 P positive regulation of alpha-beta T cell differentiation
GO:0071277 P cellular response to calcium ion
FPKM:0.79 TPM:0.87
554 A_BomoFB_comp101198_c0_seq1
801bp
 protein_kinase_ASK1_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000186 P obsolete activation of MAPKK activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004709 F MAP kinase kinase kinase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
FPKM:3.34 TPM:3.66
555 A_BomoFB_comp10119_c0_seq1
211bp
FPKM:0.50 TPM:0.55
556 A_BomoFB_comp10119_c0_seq2
397bp
FPKM:1.01 TPM:1.11
557 A_BomoFB_comp10119_c0_seq3
1036bp
 PREDICTED:_uncharacterized_protein_LOC105842335_[Bombyx_mori]
FPKM:1.85 TPM:2.02
558 A_BomoFB_comp10119_c0_seq4
272bp
 PREDICTED:_uncharacterized_protein_LOC105842335_[Bombyx_mori]
FPKM:2.76 TPM:3.02
559 A_BomoFB_comp10119_c0_seq5
689bp
 Histone-lysine_N-methyltransferase_SETMAR_[Habropoda_laboriosa]
FPKM:5.51 TPM:6.04
560 A_BomoFB_comp10119_c0_seq6
575bp
 transposase_[Danaus_plexippus]
FPKM:0.23 TPM:0.25
561 A_BomoFB_comp10119_c0_seq7
679bp
 PREDICTED:_uncharacterized_protein_LOC106125668_[Papilio_xuthus]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0032502 P developmental process
FPKM:5.69 TPM:6.24
562 A_BomoFB_comp1011_c0_seq1
260bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.03 TPM:2.22
563 A_BomoFB_comp101201_c0_seq1
1444bp
 PREDICTED:_lachesin_[Amyelois_transitella]
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0031225 C anchored component of membrane
FPKM:3.23 TPM:3.54
564 A_BomoFB_comp101202_c0_seq1
1919bp
 Peroxisomal_targeting_signal_2_receptor_[Papilio_xuthus]
GO:0001764 P neuron migration
GO:0001958 P endochondral ossification
GO:0005053 F peroxisome matrix targeting signal-2 binding
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0006625 P protein targeting to peroxisome
GO:0006635 P fatty acid beta-oxidation
GO:0006810 P transport
GO:0007031 P peroxisome organization
GO:0008611 P ether lipid biosynthetic process
GO:0015031 P protein transport
GO:0016558 P protein import into peroxisome matrix
GO:0019899 F enzyme binding
GO:0042803 F protein homodimerization activity
FPKM:3.10 TPM:3.39
565 A_BomoFB_comp10120_c0_seq1
1642bp
 PREDICTED:_uncharacterized_protein_LOC106124430_[Papilio_xuthus]
FPKM:1.58 TPM:1.74
566 A_BomoFB_comp10120_c0_seq2
1120bp
 hypothetical_protein_KGM_04619_[Danaus_plexippus]
FPKM:2.11 TPM:2.31
567 A_BomoFB_comp10120_c0_seq3
909bp
 PREDICTED:_zinc_finger_protein_on_ecdysone_puffs-like_[Amyelois_transitella]
FPKM:0.56 TPM:0.62
568 A_BomoFB_comp10120_c0_seq4
1885bp
 hypothetical_protein_KGM_04619_[Danaus_plexippus]
FPKM:4.51 TPM:4.95
569 A_BomoFB_comp10120_c0_seq5
3023bp
 PREDICTED:_uncharacterized_protein_LOC106124430_[Papilio_xuthus]
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
570 A_BomoFB_comp10120_c0_seq6
2290bp
 PREDICTED:_zinc_finger_protein_on_ecdysone_puffs-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:11.00 TPM:12.06
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