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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4591 A_BomoFB_comp10564_c3_seq20
805bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.00 TPM:0.00
4592 A_BomoFB_comp10564_c3_seq21
1611bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.66 TPM:1.82
4593 A_BomoFB_comp10564_c3_seq22
3038bp
 PREDICTED:_uncharacterized_protein_LOC101737183_[Bombyx_mori]
FPKM:0.13 TPM:0.14
4594 A_BomoFB_comp10564_c3_seq23
741bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:1.34 TPM:1.46
4595 A_BomoFB_comp10564_c3_seq24
1342bp
 PREDICTED:_methylenetetrahydrofolate_reductase_[Amyelois_transitella]
GO:0001666 P response to hypoxia
GO:0003824 F catalytic activity
GO:0004489 F methylenetetrahydrofolate reductase (NAD(P)H) activity
GO:0005829 C cytosol
GO:0006520 P cellular amino acid metabolic process
GO:0006555 P methionine metabolic process
GO:0008015 P blood circulation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0031060 P regulation of histone methylation
GO:0032403 F protein-containing complex binding
GO:0033274 P response to vitamin B2
GO:0035999 P tetrahydrofolate interconversion
GO:0042493 P response to xenobiotic stimulus
GO:0043005 C neuron projection
GO:0043200 P response to amino acid
GO:0046500 P S-adenosylmethionine metabolic process
GO:0046653 P tetrahydrofolate metabolic process
GO:0046655 P folic acid metabolic process
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0050667 P homocysteine metabolic process
GO:0051593 P response to folic acid
GO:0055114 P obsolete oxidation-reduction process
GO:0070555 P response to interleukin-1
GO:0070829 P obsolete heterochromatin maintenance
GO:0072341 F modified amino acid binding
FPKM:2.45 TPM:2.68
4596 A_BomoFB_comp10564_c3_seq25
1572bp
 PREDICTED:_methylenetetrahydrofolate_reductase_[Amyelois_transitella]
GO:0001666 P response to hypoxia
GO:0003824 F catalytic activity
GO:0004489 F methylenetetrahydrofolate reductase (NAD(P)H) activity
GO:0005829 C cytosol
GO:0006520 P cellular amino acid metabolic process
GO:0006555 P methionine metabolic process
GO:0008015 P blood circulation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0031060 P regulation of histone methylation
GO:0032403 F protein-containing complex binding
GO:0033274 P response to vitamin B2
GO:0035999 P tetrahydrofolate interconversion
GO:0042493 P response to xenobiotic stimulus
GO:0043005 C neuron projection
GO:0043200 P response to amino acid
GO:0046500 P S-adenosylmethionine metabolic process
GO:0046653 P tetrahydrofolate metabolic process
GO:0046655 P folic acid metabolic process
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0050667 P homocysteine metabolic process
GO:0051593 P response to folic acid
GO:0055114 P obsolete oxidation-reduction process
GO:0070555 P response to interleukin-1
GO:0070829 P obsolete heterochromatin maintenance
GO:0072341 F modified amino acid binding
FPKM:2.81 TPM:3.08
4597 A_BomoFB_comp10564_c3_seq26
1824bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.73 TPM:2.99
4598 A_BomoFB_comp10564_c3_seq27
593bp
 acid--CoA_ligase_[Aeromicrobium_sp._Leaf272]
FPKM:0.27 TPM:0.29
4599 A_BomoFB_comp10564_c3_seq28
722bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC105841478_[Bombyx_mori]
FPKM:3.66 TPM:4.01
4600 A_BomoFB_comp10564_c3_seq29
1587bp
 PREDICTED:_methylenetetrahydrofolate_reductase_[Amyelois_transitella]
GO:0001666 P response to hypoxia
GO:0003824 F catalytic activity
GO:0004489 F methylenetetrahydrofolate reductase (NAD(P)H) activity
GO:0005829 C cytosol
GO:0006520 P cellular amino acid metabolic process
GO:0006555 P methionine metabolic process
GO:0008015 P blood circulation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0031060 P regulation of histone methylation
GO:0032403 F protein-containing complex binding
GO:0033274 P response to vitamin B2
GO:0035999 P tetrahydrofolate interconversion
GO:0042493 P response to xenobiotic stimulus
GO:0043005 C neuron projection
GO:0043200 P response to amino acid
GO:0046500 P S-adenosylmethionine metabolic process
GO:0046653 P tetrahydrofolate metabolic process
GO:0046655 P folic acid metabolic process
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0050667 P homocysteine metabolic process
GO:0051593 P response to folic acid
GO:0055114 P obsolete oxidation-reduction process
GO:0070555 P response to interleukin-1
GO:0070829 P obsolete heterochromatin maintenance
GO:0072341 F modified amino acid binding
FPKM:0.37 TPM:0.40
4601 A_BomoFB_comp10564_c3_seq3
832bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC105841478_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4602 A_BomoFB_comp10564_c3_seq30
1209bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.00 TPM:0.00
4603 A_BomoFB_comp10564_c3_seq31
435bp
FPKM:2.48 TPM:2.72
4604 A_BomoFB_comp10564_c3_seq32
305bp
 cobaltochelatase_subunit_CobN_[Burkholderia_multivorans]
FPKM:1.48 TPM:1.62
4605 A_BomoFB_comp10564_c3_seq4
387bp
 PREDICTED:_zinc_finger_protein_184-like_[Haplochromis_burtoni]
FPKM:0.52 TPM:0.57
4606 A_BomoFB_comp10564_c3_seq5
2825bp
 PREDICTED:_uncharacterized_protein_LOC101737183_[Bombyx_mori]
FPKM:3.44 TPM:3.77
4607 A_BomoFB_comp10564_c3_seq6
1207bp
FPKM:4.47 TPM:4.90
4608 A_BomoFB_comp10564_c3_seq7
2019bp
 PREDICTED:_uncharacterized_protein_LOC101737183_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4609 A_BomoFB_comp10564_c3_seq8
1747bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.43 TPM:1.57
4610 A_BomoFB_comp10564_c3_seq9
2442bp
 PREDICTED:_uncharacterized_protein_LOC101737183_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4611 A_BomoFB_comp1056506_c0_seq1
225bp
FPKM:2.21 TPM:2.42
4612 A_BomoFB_comp10565_c0_seq1
706bp
 PREDICTED:_uncharacterized_protein_LOC101743591_isoform_X3_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4613 A_BomoFB_comp10565_c0_seq10
1181bp
 PREDICTED:_uncharacterized_protein_LOC101743591_isoform_X2_[Bombyx_mori]
FPKM:1.86 TPM:2.03
4614 A_BomoFB_comp10565_c0_seq11
229bp
 PREDICTED:_uncharacterized_protein_LOC101743591_isoform_X3_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4615 A_BomoFB_comp10565_c0_seq12
517bp
 PREDICTED:_uncharacterized_protein_LOC101743591_isoform_X2_[Bombyx_mori]
FPKM:0.60 TPM:0.66
4616 A_BomoFB_comp10565_c0_seq13
1480bp
 PREDICTED:_uncharacterized_protein_LOC101743310_isoform_X5_[Bombyx_mori]
FPKM:1.81 TPM:1.98
4617 A_BomoFB_comp10565_c0_seq14
538bp
 PREDICTED:_uncharacterized_protein_LOC101743591_isoform_X3_[Bombyx_mori]
FPKM:1.12 TPM:1.22
4618 A_BomoFB_comp10565_c0_seq15
1595bp
 PREDICTED:_uncharacterized_protein_LOC101743310_isoform_X5_[Bombyx_mori]
FPKM:0.78 TPM:0.85
4619 A_BomoFB_comp10565_c0_seq16
951bp
 PREDICTED:_uncharacterized_protein_LOC101743591_isoform_X3_[Bombyx_mori]
FPKM:0.34 TPM:0.37
4620 A_BomoFB_comp10565_c0_seq17
326bp
FPKM:3.78 TPM:4.14
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