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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4471 A_BomoFB_comp10561_c4_seq95
1477bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4472 A_BomoFB_comp10561_c4_seq96
4145bp
 olfactory_receptor_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4473 A_BomoFB_comp1056239_c0_seq1
329bp
FPKM:1.11 TPM:1.22
4474 A_BomoFB_comp10562_c0_seq1
203bp
FPKM:1.70 TPM:1.86
4475 A_BomoFB_comp10562_c1_seq1
545bp
FPKM:0.86 TPM:0.95
4476 A_BomoFB_comp10562_c1_seq10
821bp
 PREDICTED:_uncharacterized_protein_LOC101747033_[Bombyx_mori]
FPKM:5.61 TPM:6.15
4477 A_BomoFB_comp10562_c1_seq11
2296bp
 PREDICTED:_transcription_factor_CP2-like_protein_1_isoform_X1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0043565 F sequence-specific DNA binding
FPKM:7.95 TPM:8.71
4478 A_BomoFB_comp10562_c1_seq12
2977bp
 PREDICTED:_threonine--tRNA_ligase,_cytoplasmic_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004829 F threonine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006435 P threonyl-tRNA aminoacylation
GO:0015629 C actin cytoskeleton
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
GO:0070062 C extracellular exosome
FPKM:2.07 TPM:2.27
4479 A_BomoFB_comp10562_c1_seq13
3220bp
 PREDICTED:_threonine--tRNA_ligase,_cytoplasmic_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004829 F threonine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006435 P threonyl-tRNA aminoacylation
GO:0015629 C actin cytoskeleton
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
GO:0070062 C extracellular exosome
FPKM:0.55 TPM:0.60
4480 A_BomoFB_comp10562_c1_seq14
1025bp
 PREDICTED:_ecto-nucleotidase_isoform_X1_[Bombyx_mori]
FPKM:2.64 TPM:2.89
4481 A_BomoFB_comp10562_c1_seq15
392bp
FPKM:2.34 TPM:2.56
4482 A_BomoFB_comp10562_c1_seq16
306bp
FPKM:5.68 TPM:6.23
4483 A_BomoFB_comp10562_c1_seq17
1118bp
 PREDICTED:_uncharacterized_protein_LOC101747033_[Bombyx_mori]
FPKM:7.28 TPM:7.97
4484 A_BomoFB_comp10562_c1_seq18
345bp
FPKM:4.42 TPM:4.85
4485 A_BomoFB_comp10562_c1_seq19
3389bp
 PREDICTED:_uncharacterized_protein_LOC101747033_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4486 A_BomoFB_comp10562_c1_seq2
2998bp
 PREDICTED:_threonine--tRNA_ligase,_cytoplasmic_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004829 F threonine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006435 P threonyl-tRNA aminoacylation
GO:0015629 C actin cytoskeleton
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
GO:0070062 C extracellular exosome
FPKM:2.40 TPM:2.63
4487 A_BomoFB_comp10562_c1_seq20
461bp
FPKM:0.00 TPM:0.00
4488 A_BomoFB_comp10562_c1_seq21
3203bp
 PREDICTED:_threonine--tRNA_ligase,_cytoplasmic_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004829 F threonine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006435 P threonyl-tRNA aminoacylation
GO:0015629 C actin cytoskeleton
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
GO:0070062 C extracellular exosome
FPKM:1.42 TPM:1.55
4489 A_BomoFB_comp10562_c1_seq22
3368bp
 PREDICTED:_uncharacterized_protein_LOC101747033_[Bombyx_mori]
FPKM:1.67 TPM:1.83
4490 A_BomoFB_comp10562_c1_seq23
1431bp
 PREDICTED:_transcription_factor_CP2-like_protein_1_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0043565 F sequence-specific DNA binding
FPKM:13.29 TPM:14.56
4491 A_BomoFB_comp10562_c1_seq24
3406bp
 PREDICTED:_uncharacterized_protein_LOC101747033_[Bombyx_mori]
FPKM:2.81 TPM:3.07
4492 A_BomoFB_comp10562_c1_seq25
624bp
 PREDICTED:_ecto-nucleotidase_isoform_X1_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4493 A_BomoFB_comp10562_c1_seq26
3182bp
 PREDICTED:_threonine--tRNA_ligase,_cytoplasmic_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004829 F threonine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006435 P threonyl-tRNA aminoacylation
GO:0015629 C actin cytoskeleton
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
GO:0070062 C extracellular exosome
FPKM:2.91 TPM:3.19
4494 A_BomoFB_comp10562_c1_seq27
3163bp
 PREDICTED:_uncharacterized_protein_LOC101747033_[Bombyx_mori]
FPKM:18.42 TPM:20.19
4495 A_BomoFB_comp10562_c1_seq28
758bp
FPKM:0.00 TPM:0.00
4496 A_BomoFB_comp10562_c1_seq29
1074bp
 PREDICTED:_uncharacterized_protein_LOC101747033_[Bombyx_mori]
FPKM:0.44 TPM:0.48
4497 A_BomoFB_comp10562_c1_seq3
2499bp
 PREDICTED:_threonine--tRNA_ligase,_cytoplasmic_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004829 F threonine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006435 P threonyl-tRNA aminoacylation
GO:0015629 C actin cytoskeleton
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
GO:0070062 C extracellular exosome
FPKM:0.00 TPM:0.00
4498 A_BomoFB_comp10562_c1_seq30
1016bp
 PREDICTED:_uncharacterized_protein_LOC101747033_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4499 A_BomoFB_comp10562_c1_seq31
1259bp
 PREDICTED:_uncharacterized_protein_LOC101747033_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4500 A_BomoFB_comp10562_c1_seq32
535bp
FPKM:0.00 TPM:0.00
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