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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4351 A_BomoFB_comp10560_c0_seq23
1427bp
 PREDICTED:_uncharacterized_protein_LOC105842795_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4352 A_BomoFB_comp10560_c0_seq24
1542bp
 PREDICTED:_uncharacterized_protein_LOC105842795_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4353 A_BomoFB_comp10560_c0_seq25
1328bp
 PREDICTED:_uncharacterized_protein_LOC105842795_[Bombyx_mori]
FPKM:1.35 TPM:1.48
4354 A_BomoFB_comp10560_c0_seq26
331bp
 PREDICTED:_ankyrin-3-like_[Amyelois_transitella]
FPKM:0.00 TPM:0.00
4355 A_BomoFB_comp10560_c0_seq27
1011bp
 PREDICTED:_putative_nuclease_HARBI1_[Bombyx_mori]
FPKM:0.59 TPM:0.65
4356 A_BomoFB_comp10560_c0_seq28
422bp
FPKM:3.28 TPM:3.59
4357 A_BomoFB_comp10560_c0_seq29
1759bp
 PREDICTED:_uncharacterized_protein_LOC105842795_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4358 A_BomoFB_comp10560_c0_seq3
996bp
 PREDICTED:_putative_nuclease_HARBI1_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4359 A_BomoFB_comp10560_c0_seq30
1362bp
 PREDICTED:_uncharacterized_protein_LOC105842795_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4360 A_BomoFB_comp10560_c0_seq31
1660bp
 PREDICTED:_uncharacterized_protein_LOC105842795_[Bombyx_mori]
FPKM:0.27 TPM:0.29
4361 A_BomoFB_comp10560_c0_seq32
663bp
 PREDICTED:_ankyrin-3-like_[Amyelois_transitella]
FPKM:1.66 TPM:1.82
4362 A_BomoFB_comp10560_c0_seq33
1763bp
 PREDICTED:_uncharacterized_protein_LOC105842795_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4363 A_BomoFB_comp10560_c0_seq34
1443bp
 PREDICTED:_uncharacterized_protein_LOC105842795_[Bombyx_mori]
FPKM:1.70 TPM:1.86
4364 A_BomoFB_comp10560_c0_seq35
586bp
 PREDICTED:_putative_nuclease_HARBI1_[Plutella_xylostella]
FPKM:0.00 TPM:0.00
4365 A_BomoFB_comp10560_c0_seq36
623bp
 PREDICTED:_ankyrin-3-like_[Amyelois_transitella]
FPKM:0.00 TPM:0.00
4366 A_BomoFB_comp10560_c0_seq37
1700bp
 PREDICTED:_uncharacterized_protein_LOC105842795_[Bombyx_mori]
FPKM:1.70 TPM:1.87
4367 A_BomoFB_comp10560_c0_seq4
1682bp
 PREDICTED:_uncharacterized_protein_LOC105842795_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4368 A_BomoFB_comp10560_c0_seq5
1619bp
 PREDICTED:_uncharacterized_protein_LOC105842795_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4369 A_BomoFB_comp10560_c0_seq6
804bp
 PREDICTED:_ankyrin-3-like_[Amyelois_transitella]
FPKM:0.00 TPM:0.00
4370 A_BomoFB_comp10560_c0_seq7
1477bp
 PREDICTED:_HIV_Tat-specific_factor_1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0019079 P viral genome replication
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0044822 F RNA binding
FPKM:4.81 TPM:5.27
4371 A_BomoFB_comp10560_c0_seq8
1579bp
 PREDICTED:_uncharacterized_protein_LOC105842795_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4372 A_BomoFB_comp10560_c0_seq9
412bp
FPKM:0.00 TPM:0.00
4373 A_BomoFB_comp10561_c0_seq1
223bp
FPKM:1.14 TPM:1.25
4374 A_BomoFB_comp10561_c1_seq1
617bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:5.50 TPM:6.03
4375 A_BomoFB_comp10561_c2_seq1
434bp
FPKM:1.49 TPM:1.63
4376 A_BomoFB_comp10561_c3_seq1
215bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4377 A_BomoFB_comp10561_c4_seq1
969bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4378 A_BomoFB_comp10561_c4_seq10
2102bp
 PREDICTED:_glutathione_synthetase-like_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004363 F glutathione synthase activity
GO:0005524 F ATP binding
GO:0006750 P glutathione biosynthetic process
GO:0007568 P aging
GO:0009410 P response to xenobiotic stimulus
GO:0016594 F glycine binding
GO:0016874 F ligase activity
GO:0031667 P response to nutrient levels
GO:0034612 P response to tumor necrosis factor
GO:0042277 F peptide binding
GO:0042803 F protein homodimerization activity
GO:0043200 P response to amino acid
GO:0043295 F glutathione binding
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
FPKM:0.00 TPM:0.00
4379 A_BomoFB_comp10561_c4_seq11
2009bp
 PREDICTED:_glutathione_synthetase-like_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004363 F glutathione synthase activity
GO:0005524 F ATP binding
GO:0006750 P glutathione biosynthetic process
GO:0007568 P aging
GO:0009410 P response to xenobiotic stimulus
GO:0016594 F glycine binding
GO:0016874 F ligase activity
GO:0031667 P response to nutrient levels
GO:0034612 P response to tumor necrosis factor
GO:0042277 F peptide binding
GO:0042803 F protein homodimerization activity
GO:0043200 P response to amino acid
GO:0043295 F glutathione binding
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
FPKM:0.00 TPM:0.00
4380 A_BomoFB_comp10561_c4_seq12
507bp
 PREDICTED:_RNA_polymerase_II_elongation_factor_Ell_[Bombyx_mori]
FPKM:12.54 TPM:13.74
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