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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10560_c0_seq7
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_HIV_Tat-specific_factor_1_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0019079 P viral genome replication
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0044822 F RNA binding
Transcript
Level		FPKM:4.81 TPM:5.27
ORF EntryO_BomoFB16131_3prime_partial:A_BomoFB_comp10560_c0_seq7
Sequence
(Nucleotide)
AAACTTTAGATGTACCTACTTCCGATTCCATAGAAAAATCTACTGTAGAAAGTACTCTGC
AGAAAGAAAATTCATCACAAACTGAAAAAACAGTTCTGAACATAACTGATGATAAGGGTG
AAAATGATAAGGATAATACACTTGAAGATAATGAAAAAACAAAGAAACCCTCCAAATCTA
TTACTGATTCTAGTACTTGGGGTGAGTATGCATCATACATAACTTACAAAGATAATGAAG
CTGTATATACTGACCCCTCATCAGGTCAAGCTTACACTTGGAATAAAACCAGCAATGCTT
GGGATGCTAAAGGTGATGAAGCACCTGGTCGTGTTTACAGCTATGAAGATGACACTCATA
TATACACAGAGGCTGATGGTTCAAAATATTTTTGGGATGAAACCAAGAAGGCTTGGATAC
CAAAAGTTGATGATGACTTTTTAGCTTATTATCAAATGTCTTATGGATTTATTGAAAATA
AGAAAGATGATGATGAGAAAGAGAAAGGTAGTGACAAGAAGAAGGAGTTGCAAAAAGAAG
CTATGGCTGTCAAAAGGAAAAGTGAACCGCAGTGGTTTGAACCTACTGATGATAAAAACA
CCAAAGTTTATGTATCAAACTTACCTCTAGACATGACTGAACAAGAATTTGTGGACTTAA
TGCAGAAGTGTGGTCTCGTTGAACGAGATCCAAGTAACCAAAAAATGAAAGTTAAATTAT
ACATGGACAAAGAACAAAATTGTTTCAAGGGTGATGCATTATGTACTTATATAAAAATAG
AATCCGTAGATTTAGCATTAAAATTGTTGGATGGCAGCGATTGTAAAGGCAATACCATTA
AAGTGGAAAGAGCTCAATTTCAACTAAAAGGGGAATACAATCCTGCCCTCAAACCTAAGA
AAAGAAGAAAAAAAAGAGCTGGAAAAAATTAAAAAAATGAAAGAAAAACTATTTGATTGG
AGGCCAGAGAAGTTTATTGGTGAACGTTCTAAACACGAAAGAGTAGTTATTGTTAAAAAT
TTATTCCACTCTAGTGATTTTGATAAAGAGGTTCAGCTTATTCTGGACTATCAGCAAGAT
TTGAGGGAAGAATGTGGAAAATGTGGAGACGTTCGGAAAGTAGTGCTCTATGATCGCCAT
CCTGAAGGAGTGGCACAGATAACTATGAAAGAGCCGGAACAAGCTGATGCTGTTGTTCAG
CTGATCAACGGAAGATGGTTTGGCAAAAGACAAATCACTGCAGAGATATGGGATGGCAAA
ACTAAGTACAAAATTGCTGAAACTGATGCAGACATTAATCAGAGGTTAGATAAATGGGGT
AAATTTTTGGAAGAAAAAGAAGATGATAATAAGGTAATTAAATTGCCTGTTGAAGAAAAA
GACACAGATGAGCTTAAAGTTGAAGAGGTTTCTATTGAAAAAGAAAATACTCAATACCTA
TCCGAAAAAAGTGATATAAACAATGTAAAATTAGAAG
(1477 bp)

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