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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

3181

A_BomoFB_comp105023_c0_seq1

1413bp

Bomo_Chr11

PREDICTED:_polycomb_protein_suz12-B_isoform_X2_[Bombyx_mori]

GO:0000790	C	chromatin
GO:0003677	F	DNA binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005704	C	polytene chromosome band
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007275	P	multicellular organism development
GO:0007517	P	muscle organ development
GO:0008283	P	cell population proliferation
GO:0016458	P	obsolete gene silencing
GO:0016568	P	chromatin organization
GO:0016571	P	histone methylation
GO:0022008	P	neurogenesis
GO:0031491	F	nucleosome binding
GO:0035097	C	histone methyltransferase complex
GO:0035098	C	ESC/E(Z) complex
GO:0042054	F	histone methyltransferase activity
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0046872	F	metal ion binding
GO:0046976	F	histone methyltransferase activity (H3-K27 specific)
GO:0048666	P	neuron development
GO:0048813	P	dendrite morphogenesis
GO:0070734	P	histone H3-K27 methylation
GO:2001229	P	negative regulation of response to gamma radiation

FPKM:2.21 TPM:2.42

3182

A_BomoFB_comp10502_c0_seq1

236bp

Bomo_Scaf064

FPKM:0.00 TPM:0.00

3183

A_BomoFB_comp10502_c0_seq2

396bp

Bomo_Scaf116

FPKM:1.57 TPM:1.72

3184

A_BomoFB_comp10502_c0_seq3

236bp

Bomo_Scaf064

FPKM:0.00 TPM:0.00

3185

A_BomoFB_comp10502_c0_seq4

435bp

Bomo_Scaf116

hydrolase_[Bacillus_mycoides]

FPKM:5.13 TPM:5.62

3186

A_BomoFB_comp10503_c0_seq1

273bp

Bomo_Chr22

FPKM:0.00 TPM:0.00

3187

A_BomoFB_comp10503_c0_seq2

251bp

Bomo_Chr22

FPKM:4.52 TPM:4.96

3188

A_BomoFB_comp10503_c0_seq3

216bp

Bomo_Chr22

FPKM:0.00 TPM:0.00

3189

A_BomoFB_comp10503_c0_seq4

232bp

Bomo_Chr22

FPKM:1.97 TPM:2.16

3190

A_BomoFB_comp10503_c0_seq5

215bp

Bomo_Chr22

FPKM:0.00 TPM:0.00

3191

A_BomoFB_comp1050410_c0_seq1

260bp

Bomo_Chr10

FPKM:0.68 TPM:0.74

3192

A_BomoFB_comp1050447_c0_seq1

207bp

Bomo_Chr10

sulfatase_modifying_factor_1_precursor_[Candidatus_Magnetoglobus_multicellularis_str._Araruama]

FPKM:3.11 TPM:3.41

3193

A_BomoFB_comp10504_c0_seq1

3635bp

Bomo_Chr24

blastopia_polyprotein_[Lasius_niger]

GO:0003676	F	nucleic acid binding
GO:0003723	F	RNA binding
GO:0003824	F	catalytic activity
GO:0003887	F	DNA-directed DNA polymerase activity
GO:0003964	F	RNA-directed DNA polymerase activity
GO:0004190	F	aspartic-type endopeptidase activity
GO:0004518	F	nuclease activity
GO:0004519	F	endonuclease activity
GO:0004523	F	RNA-DNA hybrid ribonuclease activity
GO:0005622	C	intracellular anatomical structure
GO:0006278	P	RNA-dependent DNA biosynthetic process
GO:0006310	P	DNA recombination
GO:0006508	P	proteolysis
GO:0008152	P	metabolic process
GO:0008233	F	peptidase activity
GO:0015074	P	DNA integration
GO:0016740	F	transferase activity
GO:0016779	F	nucleotidyltransferase activity
GO:0016787	F	hydrolase activity
GO:0019012	C	virion component
GO:0030430	C	host cell cytoplasm
GO:0042025	C	host cell nucleus
GO:0046718	P	viral entry into host cell
GO:0046872	F	metal ion binding
GO:0071897	P	DNA biosynthetic process
GO:0075713	P	establishment of integrated proviral latency
GO:0075732	P	viral penetration into host nucleus
GO:0090305	P	nucleic acid phosphodiester bond hydrolysis
GO:0090502	P	RNA phosphodiester bond hydrolysis, endonucleolytic

FPKM:2.26 TPM:2.47

3194

A_BomoFB_comp10504_c0_seq2

1489bp

Bomo_Chr12

PREDICTED:_uncharacterized_protein_LOC105391716_[Plutella_xylostella]

GO:0000166	F	nucleotide binding
GO:0000943	C	retrotransposon nucleocapsid
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003723	F	RNA binding
GO:0003824	F	catalytic activity
GO:0003887	F	DNA-directed DNA polymerase activity
GO:0003964	F	RNA-directed DNA polymerase activity
GO:0004190	F	aspartic-type endopeptidase activity
GO:0004518	F	nuclease activity
GO:0004519	F	endonuclease activity
GO:0004523	F	RNA-DNA hybrid ribonuclease activity
GO:0004540	F	ribonuclease activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0006278	P	RNA-dependent DNA biosynthetic process
GO:0006310	P	DNA recombination
GO:0006508	P	proteolysis
GO:0008152	P	metabolic process
GO:0008233	F	peptidase activity
GO:0008270	F	zinc ion binding
GO:0015074	P	DNA integration
GO:0016740	F	transferase activity
GO:0016779	F	nucleotidyltransferase activity
GO:0016787	F	hydrolase activity
GO:0019076	P	viral release from host cell
GO:0032197	P	transposition, RNA-mediated
GO:0046872	F	metal ion binding
GO:0071897	P	DNA biosynthetic process
GO:0090305	P	nucleic acid phosphodiester bond hydrolysis
GO:0090501	P	RNA phosphodiester bond hydrolysis
GO:0090502	P	RNA phosphodiester bond hydrolysis, endonucleolytic

FPKM:1.32 TPM:1.44

3195

A_BomoFB_comp10504_c0_seq3

3071bp

Bomo_Chr12

PREDICTED:_uncharacterized_protein_LOC105386002_isoform_X1_[Plutella_xylostella]

GO:0003676	F	nucleic acid binding
GO:0003723	F	RNA binding
GO:0003824	F	catalytic activity
GO:0003887	F	DNA-directed DNA polymerase activity
GO:0003964	F	RNA-directed DNA polymerase activity
GO:0004190	F	aspartic-type endopeptidase activity
GO:0004518	F	nuclease activity
GO:0004519	F	endonuclease activity
GO:0004523	F	RNA-DNA hybrid ribonuclease activity
GO:0005622	C	intracellular anatomical structure
GO:0006278	P	RNA-dependent DNA biosynthetic process
GO:0006310	P	DNA recombination
GO:0006508	P	proteolysis
GO:0008152	P	metabolic process
GO:0008233	F	peptidase activity
GO:0015074	P	DNA integration
GO:0016740	F	transferase activity
GO:0016779	F	nucleotidyltransferase activity
GO:0016787	F	hydrolase activity
GO:0019012	C	virion component
GO:0030430	C	host cell cytoplasm
GO:0042025	C	host cell nucleus
GO:0046718	P	viral entry into host cell
GO:0046872	F	metal ion binding
GO:0071897	P	DNA biosynthetic process
GO:0075713	P	establishment of integrated proviral latency
GO:0075732	P	viral penetration into host nucleus
GO:0090305	P	nucleic acid phosphodiester bond hydrolysis
GO:0090502	P	RNA phosphodiester bond hydrolysis, endonucleolytic

FPKM:5.09 TPM:5.58

3196

A_BomoFB_comp10505_c1_seq1

730bp

Bomo_Chr11

olfactory_receptor_[Bombyx_mori]

FPKM:5.26 TPM:5.76

3197

A_BomoFB_comp10505_c1_seq2

1128bp

Bomo_Scaf111

FPKM:11.08 TPM:12.14

3198

A_BomoFB_comp10505_c1_seq3

243bp

Bomo_Chr23

FPKM:4.19 TPM:4.59

3199

A_BomoFB_comp10505_c1_seq4

801bp

Bomo_Scaf111

FPKM:3.16 TPM:3.46

3200

A_BomoFB_comp10505_c1_seq5

733bp

Bomo_Chr7

FPKM:1.78 TPM:1.95

3201

A_BomoFB_comp10505_c1_seq6

3063bp

Bomo_Scaf007

PREDICTED:_uncharacterized_protein_LOC105841802_[Bombyx_mori]

FPKM:3.04 TPM:3.33

3202

A_BomoFB_comp10505_c1_seq7

634bp

Bomo_Chr13

Uncharacterized_protein_CELE_F38E1.11_[Caenorhabditis_elegans]

FPKM:1.44 TPM:1.58

3203

A_BomoFB_comp10505_c1_seq8

290bp

Bomo_Chr10

glutamate_transporter_[Bombyx_mori]

FPKM:5.00 TPM:5.47

3204

A_BomoFB_comp10505_c2_seq1

1199bp

Bomo_Scaf140

PREDICTED:_IQ_and_AAA_domain-containing_protein_1-like_[Bombyx_mori]

FPKM:20.79 TPM:22.78

3205

A_BomoFB_comp10505_c2_seq10

1192bp

Bomo_Chr22

PREDICTED:_polyadenylate-binding_protein-interacting_protein_1_isoform_X2_[Amyelois_transitella]

FPKM:25.99 TPM:28.48

3206

A_BomoFB_comp10505_c2_seq11

259bp

Bomo_Scaf048

hypothetical_protein_SY88_15845_[Clostridiales_bacterium_PH28_bin88]

FPKM:2.74 TPM:3.00

3207

A_BomoFB_comp10505_c2_seq12

1279bp

Bomo_Scaf004

PREDICTED:_15-hydroxyprostaglandin_dehydrogenase_[NAD(+)]-like_[Bombyx_mori]

GO:0003824	F	catalytic activity
GO:0004957	F	prostaglandin E receptor activity
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:0006629	P	lipid metabolic process
GO:0006631	P	fatty acid metabolic process
GO:0006693	P	prostaglandin metabolic process
GO:0007179	P	transforming growth factor beta receptor signaling pathway
GO:0007565	P	female pregnancy
GO:0007567	P	parturition
GO:0008152	P	metabolic process
GO:0016323	C	basolateral plasma membrane
GO:0016404	F	15-hydroxyprostaglandin dehydrogenase (NAD+) activity
GO:0016491	F	oxidoreductase activity
GO:0030728	P	ovulation
GO:0045786	P	negative regulation of cell cycle
GO:0051287	F	NAD binding
GO:0055114	P	obsolete oxidation-reduction process
GO:0070062	C	extracellular exosome
GO:0070403	F	NAD+ binding
GO:0070493	P	thrombin-activated receptor signaling pathway
GO:0097070	P	ductus arteriosus closure

FPKM:2.38 TPM:2.61

3208

A_BomoFB_comp10505_c2_seq13

1276bp

Bomo_Scaf109

PREDICTED:_15-hydroxyprostaglandin_dehydrogenase_[NAD(+)]-like_[Bombyx_mori]

GO:0003824	F	catalytic activity
GO:0004957	F	prostaglandin E receptor activity
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:0006629	P	lipid metabolic process
GO:0006631	P	fatty acid metabolic process
GO:0006693	P	prostaglandin metabolic process
GO:0007179	P	transforming growth factor beta receptor signaling pathway
GO:0007565	P	female pregnancy
GO:0007567	P	parturition
GO:0008152	P	metabolic process
GO:0016323	C	basolateral plasma membrane
GO:0016404	F	15-hydroxyprostaglandin dehydrogenase (NAD+) activity
GO:0016491	F	oxidoreductase activity
GO:0030728	P	ovulation
GO:0045786	P	negative regulation of cell cycle
GO:0051287	F	NAD binding
GO:0055114	P	obsolete oxidation-reduction process
GO:0070062	C	extracellular exosome
GO:0070403	F	NAD+ binding
GO:0070493	P	thrombin-activated receptor signaling pathway
GO:0097070	P	ductus arteriosus closure