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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2131 A_BomoFB_comp10418_c0_seq1
1792bp
 glutathione_S-transferase_omega_2_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0004734 F pyrimidodiazepine synthase activity
GO:0005737 C cytoplasm
GO:0006726 P eye pigment biosynthetic process
GO:0006728 P pteridine biosynthetic process
GO:0006749 P glutathione metabolic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016782 F transferase activity, transferring sulphur-containing groups
GO:0042803 F protein homodimerization activity
GO:0045174 F glutathione dehydrogenase (ascorbate) activity
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
FPKM:17.94 TPM:19.65
2132 A_BomoFB_comp10418_c0_seq2
1031bp
 hypothetical_protein_DAPPUDRAFT_251495_[Daphnia_pulex]
FPKM:4.07 TPM:4.46
2133 A_BomoFB_comp10418_c1_seq1
511bp
FPKM:8.11 TPM:8.89
2134 A_BomoFB_comp104190_c0_seq1
1551bp
 PREDICTED:_protein_Daple_[Amyelois_transitella]
GO:0001932 P regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016055 P Wnt signaling pathway
GO:0030165 F PDZ domain binding
GO:0031098 P stress-activated protein kinase signaling cascade
GO:0031648 P protein destabilization
GO:0043621 F protein self-association
GO:0051260 P protein homooligomerization
FPKM:2.74 TPM:3.00
2135 A_BomoFB_comp104192_c0_seq1
824bp
FPKM:3.30 TPM:3.62
2136 A_BomoFB_comp10419_c0_seq1
2175bp
 hypothetical_protein_RR46_09863_[Papilio_xuthus]
FPKM:4.09 TPM:4.48
2137 A_BomoFB_comp1041_c0_seq1
453bp
 PREDICTED:_cadherin-23_[Bombyx_mori]
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0001736 P establishment of planar polarity
GO:0001822 P kidney development
GO:0003007 P heart morphogenesis
GO:0003183 P mitral valve morphogenesis
GO:0003192 P mitral valve formation
GO:0003273 P cell migration involved in endocardial cushion formation
GO:0003674 F molecular_function
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007389 P pattern specification process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016477 P cell migration
GO:0021915 P neural tube development
GO:0022008 P neurogenesis
GO:0035329 P hippo signaling
GO:0036342 P post-anal tail morphogenesis
GO:0043931 P ossification involved in bone maturation
GO:0045177 C apical part of cell
GO:0048565 P digestive tract development
GO:0072006 P nephron development
GO:0072137 P condensed mesenchymal cell proliferation
GO:0072659 P protein localization to plasma membrane
GO:0090102 P cochlea development
GO:0098609 P cell-cell adhesion
FPKM:1.21 TPM:1.32
2138 A_BomoFB_comp104201_c0_seq1
1055bp
 PREDICTED:_GDT1-like_protein_5_isoform_X2_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006487 P protein N-linked glycosylation
GO:0006874 P cellular calcium ion homeostasis
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0032472 P Golgi calcium ion transport
GO:0032588 C trans-Golgi network membrane
GO:0035751 P regulation of lysosomal lumen pH
GO:0043231 C intracellular membrane-bounded organelle
FPKM:3.36 TPM:3.68
2139 A_BomoFB_comp10420_c0_seq1
1480bp
FPKM:11.51 TPM:12.61
2140 A_BomoFB_comp10420_c1_seq1
1540bp
FPKM:7.20 TPM:7.89
2141 A_BomoFB_comp104216_c0_seq1
682bp
FPKM:3.48 TPM:3.81
2142 A_BomoFB_comp10421_c0_seq1
3650bp
 PREDICTED:_uncharacterized_protein_LOC106709547_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:4.54 TPM:4.97
2143 A_BomoFB_comp10421_c0_seq2
3173bp
 PREDICTED:_uncharacterized_protein_LOC106709547_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:0.00 TPM:0.00
2144 A_BomoFB_comp10421_c0_seq3
528bp
FPKM:0.00 TPM:0.00
2145 A_BomoFB_comp10421_c0_seq4
625bp
FPKM:1.39 TPM:1.53
2146 A_BomoFB_comp10421_c0_seq5
650bp
FPKM:0.00 TPM:0.00
2147 A_BomoFB_comp10421_c0_seq6
3163bp
 PREDICTED:_uncharacterized_protein_LOC106709547_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:0.00 TPM:0.00
2148 A_BomoFB_comp104220_c0_seq1
954bp
FPKM:2.39 TPM:2.62
2149 A_BomoFB_comp104221_c0_seq1
2495bp
 PREDICTED:_WD_repeat-containing_protein_7_[Bombyx_mori]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005737 C cytoplasm
GO:0008021 C synaptic vesicle
FPKM:2.68 TPM:2.93
2150 A_BomoFB_comp104227_c0_seq1
977bp
 PREDICTED:_WD_repeat-containing_protein_CG11141_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:1.71 TPM:1.87
2151 A_BomoFB_comp10422_c0_seq1
2406bp
 PREDICTED:_uncharacterized_protein_LOC105396231_[Plutella_xylostella]
FPKM:9.65 TPM:10.57
2152 A_BomoFB_comp10422_c0_seq2
364bp
 PREDICTED:_uncharacterized_protein_LOC101736214_[Bombyx_mori]
FPKM:1.50 TPM:1.64
2153 A_BomoFB_comp10422_c0_seq3
2285bp
 PREDICTED:_uncharacterized_protein_LOC105396231_[Plutella_xylostella]
FPKM:2.04 TPM:2.24
2154 A_BomoFB_comp10423_c0_seq1
1184bp
FPKM:9.33 TPM:10.22
2155 A_BomoFB_comp10423_c0_seq2
219bp
FPKM:0.00 TPM:0.00
2156 A_BomoFB_comp104248_c0_seq1
1048bp
 hypothetical_protein_OBRU01_12883_[Operophtera_brumata]
FPKM:2.70 TPM:2.96
2157 A_BomoFB_comp10424_c0_seq1
1808bp
 PREDICTED:_hexokinase-2-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001678 P cellular glucose homeostasis
GO:0004340 F glucokinase activity
GO:0004396 F hexokinase activity
GO:0005524 F ATP binding
GO:0005536 F glucose binding
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006000 P fructose metabolic process
GO:0006006 P glucose metabolic process
GO:0006013 P mannose metabolic process
GO:0006096 P glycolytic process
GO:0008865 F fructokinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019158 F mannokinase activity
GO:0019318 P hexose metabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0051156 P glucose 6-phosphate metabolic process
FPKM:121.73 TPM:133.39
2158 A_BomoFB_comp104257_c0_seq1
289bp
 PREDICTED:_nodal_modulator_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
FPKM:5.04 TPM:5.52
2159 A_BomoFB_comp10425_c0_seq1
766bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2160 A_BomoFB_comp10425_c0_seq10
636bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.55 TPM:1.70
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