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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1681 A_BomoFB_comp10366_c0_seq4
381bp
FPKM:0.00 TPM:0.00
1682 A_BomoFB_comp10366_c0_seq5
2016bp
 PREDICTED:_uncharacterized_protein_LOC106125042_[Papilio_xuthus]
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
FPKM:2.09 TPM:2.29
1683 A_BomoFB_comp10367_c0_seq1
1761bp
 PREDICTED:_H/ACA_ribonucleoprotein_complex_subunit_4_[Amyelois_transitella]
GO:0000495 P box H/ACA RNA 3'-end processing
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0007281 P germ cell development
GO:0009267 P cellular response to starvation
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0022008 P neurogenesis
GO:0030529 C ribonucleoprotein complex
GO:0031118 P rRNA pseudouridine synthesis
GO:0031120 P snRNA pseudouridine synthesis
GO:0031429 C box H/ACA snoRNP complex
GO:0035220 P wing disc development
GO:0042254 P ribosome biogenesis
GO:1990481 P mRNA pseudouridine synthesis
FPKM:7.26 TPM:7.95
1684 A_BomoFB_comp10368_c0_seq1
930bp
FPKM:1.01 TPM:1.11
1685 A_BomoFB_comp10368_c0_seq2
829bp
 PREDICTED:_endothelin-converting_enzyme_1_[Bombyx_mori]
FPKM:5.30 TPM:5.80
1686 A_BomoFB_comp103693_c0_seq1
734bp
FPKM:3.05 TPM:3.35
1687 A_BomoFB_comp10369_c0_seq1
2124bp
 PREDICTED:_sugar_transporter_protein_3_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:7.55 TPM:8.28
1688 A_BomoFB_comp10370_c0_seq1
1085bp
 PREDICTED:_low_molecular_30_kDa_lipoprotein_PBMHP-12_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005615 C extracellular space
FPKM:90097.73 TPM:98721.89
1689 A_BomoFB_comp10371_c0_seq1
4445bp
 putative_Y54G2A.42_[Danaus_plexippus]
FPKM:11.28 TPM:12.36
1690 A_BomoFB_comp10371_c0_seq2
884bp
FPKM:2.72 TPM:2.98
1691 A_BomoFB_comp10371_c0_seq3
968bp
FPKM:4.50 TPM:4.93
1692 A_BomoFB_comp10372_c0_seq1
1837bp
 PREDICTED:_mitogen-activated_protein_kinase_kinase_kinase_kinase_4_isoform_X1_[Papilio_xuthus]
GO:0000003 P reproduction
GO:0000166 F nucleotide binding
GO:0002119 P nematode larval development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0010171 P body morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0023014 P signal transduction
GO:0030334 P regulation of cell migration
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0033563 P dorsal/ventral axon guidance
GO:0048812 P neuron projection morphogenesis
FPKM:3.43 TPM:3.76
1693 A_BomoFB_comp10372_c0_seq2
3138bp
 PREDICTED:_mitogen-activated_protein_kinase_kinase_kinase_kinase_4_isoform_X1_[Papilio_xuthus]
GO:0000003 P reproduction
GO:0000166 F nucleotide binding
GO:0002119 P nematode larval development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0010171 P body morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0023014 P signal transduction
GO:0030334 P regulation of cell migration
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0033563 P dorsal/ventral axon guidance
GO:0048812 P neuron projection morphogenesis
FPKM:0.73 TPM:0.80
1694 A_BomoFB_comp10372_c0_seq3
1163bp
 Serine/threonine-protein_kinase_mig-15_[Operophtera_brumata]
FPKM:0.10 TPM:0.11
1695 A_BomoFB_comp10372_c0_seq4
2798bp
 PREDICTED:_mitogen-activated_protein_kinase_kinase_kinase_kinase_4_isoform_X1_[Papilio_xuthus]
GO:0000003 P reproduction
GO:0000166 F nucleotide binding
GO:0002119 P nematode larval development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0010171 P body morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0023014 P signal transduction
GO:0030334 P regulation of cell migration
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0033563 P dorsal/ventral axon guidance
GO:0048812 P neuron projection morphogenesis
FPKM:5.74 TPM:6.29
1696 A_BomoFB_comp10372_c0_seq5
1503bp
 Serine/threonine-protein_kinase_mig-15_[Operophtera_brumata]
FPKM:1.45 TPM:1.59
1697 A_BomoFB_comp10372_c0_seq6
1859bp
 Serine/threonine-protein_kinase_mig-15_[Papilio_xuthus]
GO:0000003 P reproduction
GO:0000166 F nucleotide binding
GO:0002119 P nematode larval development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0010171 P body morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0023014 P signal transduction
GO:0030334 P regulation of cell migration
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0033563 P dorsal/ventral axon guidance
GO:0048812 P neuron projection morphogenesis
FPKM:6.07 TPM:6.65
1698 A_BomoFB_comp10373_c0_seq1
264bp
 PREDICTED:_uncharacterized_protein_LOC105842498_[Bombyx_mori]
FPKM:4.53 TPM:4.96
1699 A_BomoFB_comp10373_c0_seq2
212bp
 ubiquinone_biosynthesis_protein_UbiA_[Capnocytophaga_sp._oral_taxon_338]
FPKM:8.50 TPM:9.31
1700 A_BomoFB_comp10373_c0_seq3
1418bp
 PREDICTED:_uncharacterized_protein_LOC105842498_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1701 A_BomoFB_comp10373_c0_seq4
1442bp
 PREDICTED:_uncharacterized_protein_LOC105842498_[Bombyx_mori]
FPKM:3.28 TPM:3.59
1702 A_BomoFB_comp10373_c0_seq5
353bp
 PREDICTED:_uncharacterized_protein_LOC105842498_[Bombyx_mori]
FPKM:13.81 TPM:15.13
1703 A_BomoFB_comp10373_c0_seq6
297bp
 PREDICTED:_uncharacterized_protein_LOC105842498_[Bombyx_mori]
FPKM:1.21 TPM:1.33
1704 A_BomoFB_comp10374_c0_seq1
2101bp
 ras-related_GTP-binding_protein_Rab11_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000910 P cytokinesis
GO:0000922 C spindle pole
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005771 C multivesicular body
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005813 C centrosome
GO:0005828 C kinetochore microtubule
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006913 P nucleocytoplasmic transport
GO:0007049 P cell cycle
GO:0007080 P mitotic metaphase plate congression
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010634 P positive regulation of epithelial cell migration
GO:0010796 P regulation of multivesicular body size
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030133 C transport vesicle
GO:0030424 C axon
GO:0030953 P astral microtubule organization
GO:0031175 P neuron projection development
GO:0031410 C cytoplasmic vesicle
GO:0031489 F myosin V binding
GO:0031982 C vesicle
GO:0032154 C cleavage furrow
GO:0032402 P melanosome transport
GO:0036258 P multivesicular body assembly
GO:0043234 C protein-containing complex
GO:0045335 C phagocytic vesicle
GO:0045773 P positive regulation of axon extension
GO:0048169 P regulation of long-term neuronal synaptic plasticity
GO:0048471 C perinuclear region of cytoplasm
GO:0051223 P regulation of protein transport
GO:0051650 P establishment of vesicle localization
GO:0055037 C recycling endosome
GO:0055038 C recycling endosome membrane
GO:0060627 P regulation of vesicle-mediated transport
GO:0070062 C extracellular exosome
GO:0072594 P establishment of protein localization to organelle
GO:0072659 P protein localization to plasma membrane
GO:0090150 P establishment of protein localization to membrane
GO:0090307 P mitotic spindle assembly
GO:1990182 P exosomal secretion
FPKM:0.00 TPM:0.00
1705 A_BomoFB_comp10374_c0_seq10
751bp
 PREDICTED:_uncharacterized_protein_LOC107037018_[Diachasma_alloeum]
FPKM:0.00 TPM:0.00
1706 A_BomoFB_comp10374_c0_seq11
407bp
 PREDICTED:_uncharacterized_protein_LOC105841802_[Bombyx_mori]
FPKM:30.45 TPM:33.36
1707 A_BomoFB_comp10374_c0_seq12
1218bp
 PREDICTED:_uncharacterized_protein_LOC105841802_[Bombyx_mori]
FPKM:6.92 TPM:7.58
1708 A_BomoFB_comp10374_c0_seq13
1746bp
 ras-related_GTP-binding_protein_Rab11_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000910 P cytokinesis
GO:0000922 C spindle pole
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005771 C multivesicular body
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005813 C centrosome
GO:0005828 C kinetochore microtubule
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006913 P nucleocytoplasmic transport
GO:0007049 P cell cycle
GO:0007080 P mitotic metaphase plate congression
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010634 P positive regulation of epithelial cell migration
GO:0010796 P regulation of multivesicular body size
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030133 C transport vesicle
GO:0030424 C axon
GO:0030953 P astral microtubule organization
GO:0031175 P neuron projection development
GO:0031410 C cytoplasmic vesicle
GO:0031489 F myosin V binding
GO:0031982 C vesicle
GO:0032154 C cleavage furrow
GO:0032402 P melanosome transport
GO:0036258 P multivesicular body assembly
GO:0043234 C protein-containing complex
GO:0045335 C phagocytic vesicle
GO:0045773 P positive regulation of axon extension
GO:0048169 P regulation of long-term neuronal synaptic plasticity
GO:0048471 C perinuclear region of cytoplasm
GO:0051223 P regulation of protein transport
GO:0051650 P establishment of vesicle localization
GO:0055037 C recycling endosome
GO:0055038 C recycling endosome membrane
GO:0060627 P regulation of vesicle-mediated transport
GO:0070062 C extracellular exosome
GO:0072594 P establishment of protein localization to organelle
GO:0072659 P protein localization to plasma membrane
GO:0090150 P establishment of protein localization to membrane
GO:0090307 P mitotic spindle assembly
GO:1990182 P exosomal secretion
FPKM:0.00 TPM:0.00
1709 A_BomoFB_comp10374_c0_seq14
675bp
FPKM:70.03 TPM:76.73
1710 A_BomoFB_comp10374_c0_seq15
959bp
 PREDICTED:_uncharacterized_protein_LOC105841802_[Bombyx_mori]
FPKM:0.00 TPM:0.00
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