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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10367_c0_seq1
Scaffold_idBomo_Scaf071
NCBI non-redundant
(nr)		PREDICTED:_H/ACA_ribonucleoprotein_complex_subunit_4_[Amyelois_transitella]
Ontology
GO:0000495 P box H/ACA RNA 3'-end processing
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0007281 P germ cell development
GO:0009267 P cellular response to starvation
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0022008 P neurogenesis
GO:0030529 C ribonucleoprotein complex
GO:0031118 P rRNA pseudouridine synthesis
GO:0031120 P snRNA pseudouridine synthesis
GO:0031429 C box H/ACA snoRNP complex
GO:0035220 P wing disc development
GO:0042254 P ribosome biogenesis
GO:1990481 P mRNA pseudouridine synthesis
Transcript
Level		FPKM:7.26 TPM:7.95
ORF EntryO_BomoFB13397_5prime_partial:A_BomoFB_comp10367_c0_seq1
Sequence
(Nucleotide)
TTGTCTGTCAAATCTAAACGTAACTCAGTTTAAAATCTACAAACTGTTTGTTTTGCAACA
TCAAATTCATTCATCAACCTCTTGTTTATCTTTCTTCTTTTTCTTTTTCTTCTCTTTGCG
CACAGAATCATCTGCTGGTTGTTCTGCTGTCTCTGGTGACTCCGATGTGTCCATAGTGGC
GTCTGCTTCGGCAGGGGCTTCACTATCTCTCTTTTTCTTCTTCTTCTTCTTTTCCTGCTT
CACCTCTATGGAGACATCGGGATCTTCTGCGTTAGCTGTGCTTGCCGTTCGCTTTCTGCT
GCCTTCCTCGACACCGTCACCATTCTCCGGTTCTTTCTTAACATTATAGTTGACGTAACT
GTTTAACCATTCTTTTGGTGTGTTCTCATTTGGTTTGCCATATTTGTCAAGTTTCCCTTG
TTGTATGAGGATTTTTTTCTGTGAGGCTTTCGGTCCGAGACCCCATTTTCTGGGGTACGT
GTCTCGTTCCATTATGACACGCTTGAGTTTCGCGGCTACACCATGATCGCATGAGGCCAT
CGTAGACGTGGTCATCAGAGCAACGGCCAACGCTACTGCCTCACCTTTAGTGGTGACTAT
TACGATTTCTTGGTCAACTTCGATGCCGTCTTCGTATCTTAAAATACCTGGTAACAGCAC
TTTGGCTCCGTAGCAAACAGCATTAACAGCGCTGTCTTTGATAAATATCCTTTTGTGAGC
AATCAGGAGGCCTTCCAGAGGTTTGATTACTCGACGAAGATAAGTCTCGTCTTTGTGGTT
TTCATACGACCATTGTGCATCTAGGATGTCGTGCATCGTGACCATGCCTTCCTTCTCGCC
CTGAATGCCGGACCGTACTCGTCTGAGTTCGATCATCTGACCTCCGACGCCAAGCATCAG
ACCTAAATGCACACACATCGTCCGGATATACGATCCAGCCTCGCAACTAACCCAGAACAC
CCCAATATTCTTGTCCTGGTCGAAATCCAGGAGTTTACTGTCGTACACCGTCCTGACACG
CAGTTGTCGCTTCACGGCCGATATAAGCGGGGGCCTCTGGAATAGAGCTCCACGCAGCTT
CTCCAAGCCCTGTGTGACTTTTTGAATATTCTCTACGGCTGAATGCAAGTTGAAAACGGC
TACATACTCTTTGCCAGCGTTCTGTTGTGATTTGACGAGTCTCGTGGCGCGGTCTATGCA
AACGATAAGGCAACCCGTAACTTTCGGATCGAGCGTGCCCGAATGACCAGTCTTTTCGAC
TTTTAAAATACGTTTTATCCATGAAACTACTTCGTGGGAGCTGGGGTTGCTCGGTTTGTC
GACGTTGATGAAGCCAGATTTGACGTAATCAGAGATGGGGCGTTTTAAAGGCGAGTTGCC
GAATGGTAGCGGCGTGTAATGGTTAGTGCGCACATTTAAGCGATCGAAGTTTTTCAACAA
CAAAGGCCAGTAAGCGGTGTCCAGCTTCTTCACGCTCTCCGAAGGTTCGATTTTGAAGTC
GCCAATTGTCTGAAAAGCTCCCAACGAAACACCATCCTTGTTTTTTTTCTTTTTCTTCTC
TGAAAGTGTGTCGTTACCGGGCTGCAGTACCTCCGTCATTTTGATGAATTAACACGTATC
TTTTCTTACTCTTAATTTTAGGCGATCGACGCAATCACTTGGGTAAACAATGCCCTATAA
TCGGGCACTGTTTATTGAAAGAACTTTGAAAATATAACACAATGCTCGGCCATATAGCAC
GTGCGATTCGGTTGAGGTTAG
(1761 bp)

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