SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/35635
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1621 A_BomoFB_comp10358_c2_seq14
1463bp
 hypothetical_protein_T10_5095_[Trichinella_papuae]
FPKM:3.24 TPM:3.55
1622 A_BomoFB_comp10358_c2_seq2
1125bp
 olfactory_receptor_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1623 A_BomoFB_comp10358_c2_seq3
1360bp
 hypothetical_protein_T10_5095_[Trichinella_papuae]
FPKM:2.87 TPM:3.14
1624 A_BomoFB_comp10358_c2_seq4
1431bp
 hypothetical_protein_T10_5095_[Trichinella_papuae]
FPKM:0.00 TPM:0.00
1625 A_BomoFB_comp10358_c2_seq5
771bp
 olfactory_receptor_[Bombyx_mori]
FPKM:15.05 TPM:16.49
1626 A_BomoFB_comp10358_c2_seq6
845bp
FPKM:2.54 TPM:2.79
1627 A_BomoFB_comp10358_c2_seq7
742bp
FPKM:1.70 TPM:1.86
1628 A_BomoFB_comp10358_c2_seq8
677bp
 PREDICTED:_zinc_finger_protein_718-like_isoform_X2_[Bombyx_mori]
FPKM:1.41 TPM:1.55
1629 A_BomoFB_comp10358_c2_seq9
516bp
 MarR_family_transcriptional_regulator_[Mangrovimonas_yunxiaonensis]
FPKM:0.64 TPM:0.70
1630 A_BomoFB_comp10359_c0_seq1
310bp
FPKM:0.42 TPM:0.46
1631 A_BomoFB_comp10359_c1_seq1
487bp
 PREDICTED:_fatty_acid_synthase-like_[Bombyx_mori]
GO:0001649 P osteoblast differentiation
GO:0003824 F catalytic activity
GO:0004312 F fatty acid synthase activity
GO:0004313 F [acyl-carrier-protein] S-acetyltransferase activity
GO:0004314 F [acyl-carrier-protein] S-malonyltransferase activity
GO:0004315 F 3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0004317 F 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
GO:0004319 F enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity
GO:0004320 F oleoyl-[acyl-carrier-protein] hydrolase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006084 P acetyl-CoA metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008144 F obsolete drug binding
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0015939 P pantothenate metabolic process
GO:0016020 C membrane
GO:0016295 F myristoyl-[acyl-carrier-protein] hydrolase activity
GO:0016296 F palmitoyl-[acyl-carrier-protein] hydrolase activity
GO:0016297 F acyl-[acyl-carrier-protein] hydrolase activity
GO:0016491 F oxidoreductase activity
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016829 F lyase activity
GO:0019171 F 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
GO:0030879 P mammary gland development
GO:0031177 F phosphopantetheine binding
GO:0031325 P positive regulation of cellular metabolic process
GO:0035338 P long-chain fatty-acyl-CoA biosynthetic process
GO:0042470 C melanosome
GO:0042587 C glycogen granule
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0047117 F enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity
GO:0047451 F 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070402 F NADPH binding
GO:0071353 P cellular response to interleukin-4
FPKM:9.62 TPM:10.54
1632 A_BomoFB_comp10359_c1_seq2
2241bp
 p260_[Danaus_plexippus]
GO:0001649 P osteoblast differentiation
GO:0003824 F catalytic activity
GO:0004312 F fatty acid synthase activity
GO:0004313 F [acyl-carrier-protein] S-acetyltransferase activity
GO:0004314 F [acyl-carrier-protein] S-malonyltransferase activity
GO:0004315 F 3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0004317 F 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
GO:0004319 F enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity
GO:0004320 F oleoyl-[acyl-carrier-protein] hydrolase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006084 P acetyl-CoA metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008144 F obsolete drug binding
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0015939 P pantothenate metabolic process
GO:0016020 C membrane
GO:0016295 F myristoyl-[acyl-carrier-protein] hydrolase activity
GO:0016296 F palmitoyl-[acyl-carrier-protein] hydrolase activity
GO:0016297 F acyl-[acyl-carrier-protein] hydrolase activity
GO:0016491 F oxidoreductase activity
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016829 F lyase activity
GO:0019171 F 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
GO:0030879 P mammary gland development
GO:0031177 F phosphopantetheine binding
GO:0031325 P positive regulation of cellular metabolic process
GO:0035338 P long-chain fatty-acyl-CoA biosynthetic process
GO:0042470 C melanosome
GO:0042587 C glycogen granule
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0047117 F enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity
GO:0047451 F 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070402 F NADPH binding
GO:0071353 P cellular response to interleukin-4
FPKM:15.41 TPM:16.88
1633 A_BomoFB_comp10359_c2_seq1
2825bp
 PREDICTED:_fatty_acid_synthase-like_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004312 F fatty acid synthase activity
GO:0004313 F [acyl-carrier-protein] S-acetyltransferase activity
GO:0004314 F [acyl-carrier-protein] S-malonyltransferase activity
GO:0004315 F 3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0004317 F 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
GO:0004319 F enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity
GO:0004320 F oleoyl-[acyl-carrier-protein] hydrolase activity
GO:0005623 C obsolete cell
GO:0006089 P lactate metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0016295 F myristoyl-[acyl-carrier-protein] hydrolase activity
GO:0016296 F palmitoyl-[acyl-carrier-protein] hydrolase activity
GO:0016297 F acyl-[acyl-carrier-protein] hydrolase activity
GO:0016491 F oxidoreductase activity
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016829 F lyase activity
GO:0019171 F 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
GO:0031177 F phosphopantetheine binding
GO:0032100 P positive regulation of appetite
GO:0047117 F enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity
GO:0047451 F 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.80 TPM:1.97
1634 A_BomoFB_comp10359_c2_seq2
2226bp
 PREDICTED:_fatty_acid_synthase-like_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004312 F fatty acid synthase activity
GO:0004313 F [acyl-carrier-protein] S-acetyltransferase activity
GO:0004314 F [acyl-carrier-protein] S-malonyltransferase activity
GO:0004315 F 3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0004317 F 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
GO:0004319 F enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity
GO:0004320 F oleoyl-[acyl-carrier-protein] hydrolase activity
GO:0005623 C obsolete cell
GO:0006089 P lactate metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0016295 F myristoyl-[acyl-carrier-protein] hydrolase activity
GO:0016296 F palmitoyl-[acyl-carrier-protein] hydrolase activity
GO:0016297 F acyl-[acyl-carrier-protein] hydrolase activity
GO:0016491 F oxidoreductase activity
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016829 F lyase activity
GO:0019171 F 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
GO:0031177 F phosphopantetheine binding
GO:0032100 P positive regulation of appetite
GO:0047117 F enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity
GO:0047451 F 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.10 TPM:1.21
1635 A_BomoFB_comp10359_c2_seq3
4123bp
 PREDICTED:_fatty_acid_synthase-like_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004312 F fatty acid synthase activity
GO:0004313 F [acyl-carrier-protein] S-acetyltransferase activity
GO:0004314 F [acyl-carrier-protein] S-malonyltransferase activity
GO:0004315 F 3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0004317 F 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
GO:0004319 F enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity
GO:0004320 F oleoyl-[acyl-carrier-protein] hydrolase activity
GO:0005623 C obsolete cell
GO:0006089 P lactate metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0016295 F myristoyl-[acyl-carrier-protein] hydrolase activity
GO:0016296 F palmitoyl-[acyl-carrier-protein] hydrolase activity
GO:0016297 F acyl-[acyl-carrier-protein] hydrolase activity
GO:0016491 F oxidoreductase activity
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016829 F lyase activity
GO:0019171 F 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
GO:0031177 F phosphopantetheine binding
GO:0032100 P positive regulation of appetite
GO:0047117 F enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity
GO:0047451 F 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:14.60 TPM:16.00
1636 A_BomoFB_comp10359_c2_seq4
763bp
 PREDICTED:_uncharacterized_protein_LOC105841877,_partial_[Bombyx_mori]
FPKM:2.17 TPM:2.38
1637 A_BomoFB_comp1035_c0_seq1
250bp
FPKM:2.29 TPM:2.51
1638 A_BomoFB_comp1036096_c0_seq1
219bp
FPKM:2.45 TPM:2.69
1639 A_BomoFB_comp10360_c0_seq1
3284bp
 PREDICTED:_RNA-binding_protein_fusilli_isoform_X3_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008380 P RNA splicing
GO:0043484 P regulation of RNA splicing
FPKM:20.43 TPM:22.39
1640 A_BomoFB_comp10361_c0_seq1
348bp
 FLJ37770-like_protein,_partial_[Acromyrmex_echinatior]
FPKM:0.66 TPM:0.72
1641 A_BomoFB_comp10361_c1_seq1
2664bp
 neuropeptide_receptor_B3_precursor_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0004948 F calcitonin receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007202 P activation of phospholipase C activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032841 F calcitonin binding
GO:0045762 P positive regulation of adenylate cyclase activity
FPKM:20.50 TPM:22.46
1642 A_BomoFB_comp10361_c1_seq2
1862bp
 neuropeptide_receptor_B3_precursor_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0004948 F calcitonin receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007202 P activation of phospholipase C activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032841 F calcitonin binding
GO:0045762 P positive regulation of adenylate cyclase activity
FPKM:3.48 TPM:3.81
1643 A_BomoFB_comp10361_c1_seq3
599bp
 hypothetical_protein_VITISV_032736_[Vitis_vinifera]
FPKM:1.26 TPM:1.38
1644 A_BomoFB_comp10361_c2_seq1
963bp
FPKM:4.32 TPM:4.73
1645 A_BomoFB_comp10361_c3_seq1
1062bp
 PREDICTED:_uncharacterized_protein_LOC105841986_isoform_X2_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
FPKM:1.22 TPM:1.33
1646 A_BomoFB_comp10361_c3_seq2
470bp
 Sortilin-related_receptor_[Papilio_xuthus]
FPKM:5.25 TPM:5.75
1647 A_BomoFB_comp10361_c3_seq3
253bp
 hypothetical_protein_[Plasmodium_vivax_Sal-1]
FPKM:0.00 TPM:0.00
1648 A_BomoFB_comp10361_c3_seq4
252bp
 hypothetical_protein_[Plasmodium_vivax_Sal-1]
FPKM:4.49 TPM:4.92
1649 A_BomoFB_comp10361_c3_seq5
1792bp
 PREDICTED:_uncharacterized_protein_LOC105841986_isoform_X1_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
FPKM:2.11 TPM:2.31
1650 A_BomoFB_comp10361_c3_seq6
271bp
 hypothetical_protein_[Plasmodium_vivax_Sal-1]
FPKM:0.00 TPM:0.00
previous next from show/35635

- SilkBase 1999-2023 -