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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1561 A_BomoFB_comp10343_c3_seq7
621bp
FPKM:0.00 TPM:0.00
1562 A_BomoFB_comp10343_c3_seq8
1070bp
FPKM:13.47 TPM:14.75
1563 A_BomoFB_comp10343_c3_seq9
646bp
FPKM:0.00 TPM:0.00
1564 A_BomoFB_comp10343_c4_seq1
1447bp
 PREDICTED:_L-2-hydroxyglutarate_dehydrogenase,_mitochondrial_[Papilio_machaon]
GO:0005739 C mitochondrion
GO:0016491 F oxidoreductase activity
GO:0047545 F 2-hydroxyglutarate dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:6.61 TPM:7.25
1565 A_BomoFB_comp103442_c0_seq1
813bp
 TP53-regulating_kinase_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0000408 C EKC/KEOPS complex
GO:0002039 F p53 binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0008033 P tRNA processing
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0016787 F hydrolase activity
GO:0070525 P tRNA threonylcarbamoyladenosine metabolic process
GO:1901796 P regulation of signal transduction by p53 class mediator
FPKM:3.88 TPM:4.25
1566 A_BomoFB_comp10344_c0_seq1
1416bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:3.03 TPM:3.32
1567 A_BomoFB_comp10344_c0_seq2
1575bp
 PREDICTED:_uncharacterized_protein_LOC106718363_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.17 TPM:2.38
1568 A_BomoFB_comp10344_c0_seq3
1319bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.65 TPM:2.91
1569 A_BomoFB_comp10344_c0_seq4
1022bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X4_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.00 TPM:0.00
1570 A_BomoFB_comp10345_c0_seq1
2295bp
 PREDICTED:_protein_mahjong_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0016567 P protein ubiquitination
GO:0035212 P cell competition in a multicellular organism
FPKM:4.16 TPM:4.56
1571 A_BomoFB_comp10346_c0_seq1
2751bp
 PREDICTED:_uncharacterized_protein_LOC106718363_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:17.88 TPM:19.59
1572 A_BomoFB_comp10346_c0_seq2
985bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X4_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.61 TPM:1.77
1573 A_BomoFB_comp10346_c0_seq3
3038bp
 PREDICTED:_uncharacterized_protein_LOC106718363_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:22.45 TPM:24.60
1574 A_BomoFB_comp103477_c0_seq1
546bp
FPKM:3.89 TPM:4.26
1575 A_BomoFB_comp103478_c0_seq1
270bp
FPKM:1.82 TPM:1.99
1576 A_BomoFB_comp10347_c0_seq1
2588bp
 PREDICTED:_tropomodulin-1_isoform_X1_[Bombyx_mori]
GO:0002119 P nematode larval development
GO:0003779 F actin binding
GO:0005523 F tropomyosin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005865 C striated muscle thin filament
GO:0009792 P embryo development ending in birth or egg hatching
GO:0030835 P negative regulation of actin filament depolymerization
GO:0040011 P locomotion
GO:0045214 P sarcomere organization
GO:0051015 F actin filament binding
GO:0051694 P pointed-end actin filament capping
GO:0071689 P muscle thin filament assembly
GO:1990357 C terminal web
FPKM:3.90 TPM:4.27
1577 A_BomoFB_comp10347_c0_seq2
2393bp
 PREDICTED:_tropomodulin-1_isoform_X1_[Bombyx_mori]
GO:0002119 P nematode larval development
GO:0003779 F actin binding
GO:0005523 F tropomyosin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005865 C striated muscle thin filament
GO:0009792 P embryo development ending in birth or egg hatching
GO:0030835 P negative regulation of actin filament depolymerization
GO:0040011 P locomotion
GO:0045214 P sarcomere organization
GO:0051015 F actin filament binding
GO:0051694 P pointed-end actin filament capping
GO:0071689 P muscle thin filament assembly
GO:1990357 C terminal web
FPKM:4.06 TPM:4.44
1578 A_BomoFB_comp10347_c0_seq3
1514bp
 PREDICTED:_tropomodulin-1_isoform_X2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005523 F tropomyosin binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005865 C striated muscle thin filament
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0008180 C COP9 signalosome
GO:0008344 P adult locomotory behavior
GO:0016020 C membrane
GO:0030016 C myofibril
GO:0030017 C sarcomere
GO:0030049 P muscle filament sliding
GO:0030239 P myofibril assembly
GO:0030863 C cortical cytoskeleton
GO:0051015 F actin filament binding
GO:0051694 P pointed-end actin filament capping
GO:0070307 P lens fiber cell development
FPKM:1.83 TPM:2.00
1579 A_BomoFB_comp10347_c0_seq4
1319bp
 PREDICTED:_tropomodulin-1_isoform_X2_[Bombyx_mori]
GO:0002119 P nematode larval development
GO:0003779 F actin binding
GO:0005523 F tropomyosin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005865 C striated muscle thin filament
GO:0009792 P embryo development ending in birth or egg hatching
GO:0030835 P negative regulation of actin filament depolymerization
GO:0040011 P locomotion
GO:0045214 P sarcomere organization
GO:0051015 F actin filament binding
GO:0051694 P pointed-end actin filament capping
GO:0071689 P muscle thin filament assembly
GO:1990357 C terminal web
FPKM:3.66 TPM:4.01
1580 A_BomoFB_comp10348_c0_seq1
864bp
 PREDICTED:_solute_carrier_family_25_member_36-A_[Amyelois_transitella]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:7.73 TPM:8.47
1581 A_BomoFB_comp10348_c1_seq1
1281bp
 PREDICTED:_solute_carrier_family_25_member_36_isoform_X3_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:11.37 TPM:12.46
1582 A_BomoFB_comp10349_c0_seq1
4158bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:7.75 TPM:8.49
1583 A_BomoFB_comp10349_c0_seq2
1756bp
FPKM:3.61 TPM:3.95
1584 A_BomoFB_comp10349_c0_seq3
220bp
 uncharacterized_protein_Dwil_GK22679_[Drosophila_willistoni]
FPKM:1.20 TPM:1.32
1585 A_BomoFB_comp1034_c0_seq1
243bp
 PREDICTED:_ras-related_protein_Rab-27A_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001750 C photoreceptor outer segment
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0006605 P protein targeting
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007596 P blood coagulation
GO:0008152 P metabolic process
GO:0010628 P positive regulation of gene expression
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019003 F GDP binding
GO:0019882 P antigen processing and presentation
GO:0030141 C secretory granule
GO:0030318 P melanocyte differentiation
GO:0030425 C dendrite
GO:0031489 F myosin V binding
GO:0032400 P melanosome localization
GO:0032402 P melanosome transport
GO:0032585 C multivesicular body membrane
GO:0036257 P multivesicular body organization
GO:0042470 C melanosome
GO:0043316 P cytotoxic T cell degranulation
GO:0043320 P natural killer cell degranulation
GO:0043473 P pigmentation
GO:0045921 P positive regulation of exocytosis
GO:0050766 P positive regulation of phagocytosis
GO:0051875 P pigment granule localization
GO:0051904 P pigment granule transport
GO:0070062 C extracellular exosome
GO:0070382 C exocytic vesicle
GO:0071985 P multivesicular body sorting pathway
GO:0097278 P complement-dependent cytotoxicity
GO:1903307 P positive regulation of regulated secretory pathway
GO:1903428 P positive regulation of reactive oxygen species biosynthetic process
GO:1903435 P positive regulation of constitutive secretory pathway
GO:1990182 P exosomal secretion
FPKM:0.84 TPM:0.92
1586 A_BomoFB_comp10350_c0_seq1
3716bp
 PREDICTED:_tetratricopeptide_repeat_protein_14_homolog_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:3.00 TPM:3.28
1587 A_BomoFB_comp10350_c0_seq2
3963bp
 PREDICTED:_tetratricopeptide_repeat_protein_14_homolog_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:13.58 TPM:14.88
1588 A_BomoFB_comp10350_c0_seq3
947bp
 PREDICTED:_tetratricopeptide_repeat_protein_14_homolog_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:3.98 TPM:4.36
1589 A_BomoFB_comp10350_c0_seq4
3885bp
 PREDICTED:_tetratricopeptide_repeat_protein_14_homolog_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:1.35 TPM:1.47
1590 A_BomoFB_comp10351_c0_seq1
1220bp
FPKM:5.53 TPM:6.06
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