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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5221 A_BomoEE_comp1072118_c0_seq1
373bp
FPKM:0.28 TPM:0.50
5222 A_BomoEE_comp1072127_c0_seq1
441bp
 UDP-glucosyl_transferase_[Phaseolus_vulgaris]
FPKM:0.33 TPM:0.58
5223 A_BomoEE_comp1072135_c0_seq1
560bp
 Protein_kinase-like_domain_[Pseudocohnilembus_persalinus]
FPKM:0.25 TPM:0.44
5224 A_BomoEE_comp1072137_c0_seq1
626bp
FPKM:0.18 TPM:0.31
5225 A_BomoEE_comp1072186_c0_seq1
205bp
FPKM:0.00 TPM:0.00
5226 A_BomoEE_comp10721_c0_seq1
779bp
 carboxyl/choline_esterase_CCE006a_[Helicoverpa_armigera]
GO:0004622 F lysophospholipase activity
GO:0004771 F sterol esterase activity
GO:0004806 F triglyceride lipase activity
GO:0004872 F signaling receptor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005791 C rough endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005887 C integral component of plasma membrane
GO:0006629 P lipid metabolic process
GO:0007158 P neuron cell-cell adhesion
GO:0007416 P synapse assembly
GO:0008150 P biological_process
GO:0009986 C cell surface
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0032403 F protein-containing complex binding
GO:0042043 F neurexin family protein binding
GO:0042572 P retinol metabolic process
GO:0042588 C zymogen granule
GO:0043208 F glycosphingolipid binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0050253 F retinyl-palmitate esterase activity
GO:0050804 P modulation of chemical synaptic transmission
GO:0052689 F carboxylic ester hydrolase activity
FPKM:0.21 TPM:0.37
5227 A_BomoEE_comp107223_c0_seq1
2061bp
 PREDICTED:_E3_ubiquitin-protein_ligase_UBR3_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0001701 P in utero embryonic development
GO:0001967 P suckling behavior
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007608 P sensory perception of smell
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042048 P olfactory behavior
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
FPKM:7.52 TPM:13.11
5228 A_BomoEE_comp107229_c0_seq1
382bp
 PREDICTED:_integrator_complex_subunit_1_isoform_X2_[Papilio_polytes]
FPKM:10.99 TPM:19.17
5229 A_BomoEE_comp10722_c0_seq1
891bp
FPKM:0.26 TPM:0.45
5230 A_BomoEE_comp1072323_c0_seq1
226bp
FPKM:0.14 TPM:0.24
5231 A_BomoEE_comp107234_c0_seq1
203bp
 PREDICTED:_pecanex-like_protein_1_[Bombyx_mori]
FPKM:0.00 TPM:0.00
5232 A_BomoEE_comp1072353_c0_seq1
258bp
FPKM:0.55 TPM:0.97
5233 A_BomoEE_comp10723_c0_seq1
599bp
FPKM:0.19 TPM:0.33
5234 A_BomoEE_comp107244_c0_seq1
309bp
FPKM:6.24 TPM:10.88
5235 A_BomoEE_comp1072501_c0_seq1
486bp
2Fe-2S_ferredoxin_CbiW_[Propionibacterium_acnes_JCM_18918]
FPKM:0.23 TPM:0.41
5236 A_BomoEE_comp1072538_c0_seq1
297bp
FPKM:0.13 TPM:0.23
5237 A_BomoEE_comp1072555_c0_seq1
560bp
FPKM:0.27 TPM:0.47
5238 A_BomoEE_comp10726_c0_seq1
225bp
 PREDICTED:_multiple_epidermal_growth_factor-like_domains_protein_10_[Biomphalaria_glabrata]
FPKM:0.42 TPM:0.73
5239 A_BomoEE_comp1072717_c0_seq1
427bp
 PREDICTED:_histone-lysine_N-methyltransferase_SETMAR-like_[Camponotus_floridanus]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:0.35 TPM:0.61
5240 A_BomoEE_comp1072767_c0_seq1
561bp
FPKM:0.25 TPM:0.44
5241 A_BomoEE_comp1072781_c0_seq1
274bp
FPKM:0.16 TPM:0.28
5242 A_BomoEE_comp1072865_c0_seq1
547bp
 cyclic_pyranopterin_monophosphate_synthase_accessory_protein_[Clostridium_botulinum]
FPKM:0.24 TPM:0.42
5243 A_BomoEE_comp1072873_c0_seq1
231bp
FPKM:0.26 TPM:0.44
5244 A_BomoEE_comp1072896_c0_seq1
211bp
FPKM:0.00 TPM:0.00
5245 A_BomoEE_comp1072907_c0_seq1
300bp
FPKM:0.25 TPM:0.44
5246 A_BomoEE_comp1072914_c0_seq1
428bp
 glycosyl_hydrolase_family_61_[Coprinopsis_cinerea_okayama7No_130]
FPKM:0.29 TPM:0.50
5247 A_BomoEE_comp1072943_c0_seq1
204bp
FPKM:0.00 TPM:0.00
5248 A_BomoEE_comp1072944_c0_seq1
483bp
 cuticular_protein_tweedle_motif_2_precursor_[Bombyx_mori]
FPKM:0.16 TPM:0.27
5249 A_BomoEE_comp1072968_c0_seq1
534bp
 hypothetical_protein_[Flavobacterium_reichenbachii]
FPKM:0.27 TPM:0.47
5250 A_BomoEE_comp10729_c0_seq1
660bp
FPKM:0.23 TPM:0.41
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