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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp107223_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_UBR3_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0001701 P in utero embryonic development
GO:0001967 P suckling behavior
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007608 P sensory perception of smell
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042048 P olfactory behavior
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:7.52 TPM:13.11
ORF EntryO_BomoEE90035_5prime_partial:A_BomoEE_comp107223_c0_seq1
Sequence
(Nucleotide)
GTGATATTGCACCATAGAATAAATACTTCTCAATGTAGAAACTAAATTTTATTTCAAAAA
CAAACTAAGGGTGTCACAAAAGCCATGTTAAAATCATGAATCAAAGTCTTGAACTCTTGC
AATTTAATACCGTTGTCTAGATTTCAAAATATTATCCATTTTTTAAACACAAGACGAAAC
ATATTTTTTTGGGAAAATTTATGAAATTGCTGGAAACACCAAACGGACGTAAAACGAGTT
GTTTCTGAATTGCATATTTTCAACCAAACGAAGGGAATTAATATTTTTCTTTCTTTCATC
ATTCAGTTTCATTTCATATTAAGTCGCGCAAACGCTTCTCTTTCGTTCTTTAAAGTGTTT
CTTAAACGAAAGCATGGTGAACCGTGACTTCGTAACCGAGTACAGTTCATTGCCTTATGT
AAAACTTGAAATGGCTTTTCTTCCTTGAGTGACCGAATTAAATAGTGACTTATGTGTTTC
ATGTGATCTCTATTGGTTTGTGAAGCGGTCTAAGTGTTACAATGGCTAATTCAACGGCTC
AAGTGTTAATGAAGAAGGGTAAAAGGGGGGCAGCCGCTTACATACATGCGGACTGCTCCA
GCGGATCACCACAGCACTTGGGGCCACTTCTAGACGTTCTGCTGAACCCTAGCAAGGCTA
TAGACGAGTGGGAGACCATTGACTGGTGTCGGTGGCTGCTGGCTGGAGGTAGAACACCAG
ATGAATTCGCTGCAGTCGTGCGAAGCTACGACAAACATGACAAGTGCGGCCTAGTTTGGA
TACCGCGCGTGGTCGCCTACCGCTGTCGGACGTGCGGTATATCGCCCTGCATGTCGATAT
GCAGAGAATGCTTCCACCGAGGCGATCACTCCACGCACGACTTCAACATGTTTCTATCGC
AGGCCGGTGGCGCTTGCGACTGTGGTGATAAGTCCGTCATGAAGGAAGACGGATTCTGCA
GTAACCACGGTAATAAATGTCCTCGGCCCGGCACCGTTCCCGCGGAACTGATGTGTGTTG
CTGAAGCGATGATGCCGCGGCTCATACTACGGCTGCTCCAGCACTTCAGGGAGAACAGCA
GCGGAAGCCAAACCAATTCAGACCGGTGTCGTATTGCGGTTCAAGAGTGCGAGGGCTACG
TTCAGATGTTGATGGAGTTCAATAACATGGGTGACCTCATGCGGTCGGCCATGACTAAGG
CGCTTATTAACCCACAGATGTACAGGAATCTTGTGGTTCCACCATTCCCGGACACGGAGT
ACGGGGCGTACATGGCAGAGTCACACCACATGTACGAGAGGGCGTTAGATCTGTTCCCAG
CACCGGAGCCGCCTGACGAGTACTGCCACCTGCCGGCGCTCGCGCCTCGACTGACGCACA
ACACGCTGTTGGAAGAATTCATATTCTGGACTTTCAAATACGAGTTTCCGCAGAACGTGG
TCTGCTTCTTGCTGAATATGTTACCCGACCAGGACTACAAGGAGCACCTGACGCGCACGT
TCGTGCTGCACTACGGGCGCATCCCGCTGGTGCTGGAGGCGGCCGCCGACCCCGACACGC
TGTCCAACCGCGTCGTGCACATGTCCGTGCAGCTGTTCTCCAACGAGGCGCTGGCGCTGC
GCTGCGTGCAGCACCTGCACCTGCTGCACGTCATGGTGCTCTCGCTGCGCCTCATGATGG
CCAAGATCCTCGTCCAGAACACGCTGCACGACCCCCGCCGCAACTACCACCGCGTCATCG
ACTGCACGCAGAAGGTCATGAAGGAGCACTGCTACTGGCCGCTCGTGTCCGACTTCAACA
ACGTGCTCTCGCACAAGAGCGTCGCGCTGCTGTTCCTGCAGGACGACGCGCTCATCGACA
TGTGGTTCGAGTTCCTGTCCATGCTGCAAGGCATGAACGTGAACGTGCGCGAGACCGGCG
GGCACATCGAGTTCGAGCCGTCGTCGTACTACGCGGCGTTCTCGTGCGAGCTGGAGGCGG
CCGCGTACCCCATGTGGTCCGTGCTGTCGCACCTGACGGCGCCCGAGCACGCCCCGCTGG
CGCGCCGCATGCTGGGCGCGG
(2061 bp)

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