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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4621 A_BomoEE_comp1057189_c0_seq1
473bp
FPKM:0.22 TPM:0.38
4622 A_BomoEE_comp10571_c0_seq1
313bp
FPKM:0.12 TPM:0.20
4623 A_BomoEE_comp1057239_c0_seq1
559bp
 PREDICTED:_2-hydroxyacylsphingosine_1-beta-galactosyltransferase_[Alligator_sinensis]
FPKM:0.34 TPM:0.59
4624 A_BomoEE_comp1057244_c0_seq1
351bp
 iron-sulfur_cluster_biogenesis_protein_NfuA_[Altibacter_lentus]
FPKM:0.32 TPM:0.56
4625 A_BomoEE_comp1057298_c0_seq1
434bp
FPKM:0.31 TPM:0.54
4626 A_BomoEE_comp10572_c0_seq1
643bp
FPKM:0.15 TPM:0.27
4627 A_BomoEE_comp1057312_c0_seq1
571bp
 elongation_factor_G_[Syntrophomonas_wolfei]
FPKM:0.26 TPM:0.46
4628 A_BomoEE_comp1057333_c0_seq1
319bp
FPKM:0.39 TPM:0.68
4629 A_BomoEE_comp1057349_c0_seq1
352bp
FPKM:0.23 TPM:0.40
4630 A_BomoEE_comp1057370_c0_seq1
706bp
 hypothetical_protein_[Parasitella_parasitica]
FPKM:0.20 TPM:0.34
4631 A_BomoEE_comp1057380_c0_seq1
680bp
FPKM:0.22 TPM:0.39
4632 A_BomoEE_comp1057395_c0_seq1
356bp
FPKM:0.31 TPM:0.54
4633 A_BomoEE_comp1057401_c0_seq1
1147bp
 LysR_family_transcriptional_regulator_[Clostridium_novyi]
FPKM:0.22 TPM:0.39
4634 A_BomoEE_comp1057459_c0_seq1
470bp
FPKM:0.33 TPM:0.57
4635 A_BomoEE_comp1057469_c0_seq1
316bp
 PREDICTED:_lysosomal_amino_acid_transporter_1_homolog_[Manacus_vitellinus]
FPKM:0.34 TPM:0.59
4636 A_BomoEE_comp10574_c0_seq1
211bp
 PREDICTED:_putative_transporter_ZK637.1_[Bombyx_mori]
FPKM:0.49 TPM:0.86
4637 A_BomoEE_comp10574_c0_seq2
254bp
 PREDICTED:_putative_transporter_ZK637.1_[Bombyx_mori]
FPKM:0.11 TPM:0.20
4638 A_BomoEE_comp1057509_c0_seq1
236bp
FPKM:0.12 TPM:0.21
4639 A_BomoEE_comp105751_c0_seq1
531bp
 hypothetical_protein_AZL_e00150_[Azospirillum_sp._B510]
FPKM:8.01 TPM:13.97
4640 A_BomoEE_comp1057677_c0_seq1
243bp
FPKM:0.11 TPM:0.19
4641 A_BomoEE_comp1057688_c0_seq1
329bp
 PREDICTED:_rho_GTPase-activating_protein_6_[Bombyx_mori]
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005884 C actin filament
GO:0007015 P actin filament organization
GO:0007165 P signal transduction
GO:0007202 P activation of phospholipase C activity
GO:0007266 P Rho protein signal transduction
GO:0009967 P positive regulation of signal transduction
GO:0010518 P positive regulation of phospholipase activity
GO:0015629 C actin cytoskeleton
GO:0016004 F phospholipase activator activity
GO:0017124 F SH3 domain binding
GO:0030041 P actin filament polymerization
GO:0043087 P regulation of GTPase activity
GO:0043274 F phospholipase binding
GO:0043547 P positive regulation of GTPase activity
GO:0048041 P focal adhesion assembly
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0051497 P negative regulation of stress fiber assembly
GO:0051895 P negative regulation of focal adhesion assembly
FPKM:0.42 TPM:0.72
4642 A_BomoEE_comp105771_c0_seq1
3559bp
 PREDICTED:_histone-lysine_N-methyltransferase_SETD1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000791 C euchromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0035327 C euchromatin
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044648 P histone H3-K4 dimethylation
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0048188 C Set1C/COMPASS complex
GO:0051568 P histone H3-K4 methylation
GO:0080182 P histone H3-K4 trimethylation
FPKM:7.90 TPM:13.77
4643 A_BomoEE_comp1057763_c0_seq1
596bp
 PREDICTED:_uncharacterized_protein_LOC105393224_[Plutella_xylostella]
FPKM:0.36 TPM:0.63
4644 A_BomoEE_comp1057788_c0_seq1
446bp
FPKM:0.18 TPM:0.31
4645 A_BomoEE_comp1057804_c0_seq1
239bp
FPKM:0.34 TPM:0.60
4646 A_BomoEE_comp1057855_c0_seq1
480bp
FPKM:0.34 TPM:0.60
4647 A_BomoEE_comp1057856_c0_seq1
216bp
 Alpha-hemolysin_translocation_ATP-binding_protein_HlyB_[Proteus_vulgaris]
FPKM:0.16 TPM:0.28
4648 A_BomoEE_comp1057870_c0_seq1
361bp
FPKM:0.30 TPM:0.53
4649 A_BomoEE_comp1057873_c0_seq1
294bp
FPKM:0.47 TPM:0.81
4650 A_BomoEE_comp1057874_c0_seq1
446bp
FPKM:0.33 TPM:0.57
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