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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp105771_c0_seq1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_histone-lysine_N-methyltransferase_SETD1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000791 C euchromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0035327 C euchromatin
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044648 P histone H3-K4 dimethylation
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0048188 C Set1C/COMPASS complex
GO:0051568 P histone H3-K4 methylation
GO:0080182 P histone H3-K4 trimethylation
Transcript
Level		FPKM:7.90 TPM:13.77
ORF EntryO_BomoEE90011_complete:A_BomoEE_comp105771_c0_seq1
Sequence
(Nucleotide)
AGAGGTCCTACCACCAGTAATATGATGTACAGTAGATGTCTGAGGAATTTGCGTGTGAAA
TTAGTCTTAATAGACAAATCATAATTTTACATTAAAATCTTTTTAGTAGGAAATCATATC
ATAATGTAATCGGAAAAACATATGAGGATTATGTACAGGAGTTTAATTGAGGAAGCCGCG
ACACTGCGGCGCGCCACATAAGCACGGAATTTTCTCATCTTCGAGCGGGAACTTGTAGTC
GTATGTAATTTCCTCGTCGACACCGATCGGCTGTTTTGAATATATCACGATTTTCTTCTG
TGACTCAATTGTTATGATTTTAGCGTAGCAATTCGGATTACAACTGTGGTTGATGAACCG
GGCGAGGTTCCCGCACTTGGTGGCGTCGATGATGGTGTCGAGGTCGATGCGGAAGAGGTA
GGAGCTGCCGATGCCGGTGGCCTCGTAGTGCGCCTCGCGTACGTCCGCCACTATGGGCCG
GATCATCTGCCCAACGTACTCGATCACCATCTCGTCCGCCGCTATCGGCTCCTGAGCGAA
CAGGCCCCAGTCGTGGATACCAGACTTAGCAAACTTAAGCTGCTTCTTTCTGAACTTGAG
CTGATTGAATTTCAGAAGATCGGAGTCCGTGTCGGTTCCGAAAGCCGTGAGCAATCTCCT
CTGGTTTGACCTAGCTTCCCTCGATAGCAGTTGCATCTTGGAAGCTTTCTTATCATCAGG
CGGCGCTTGTATCGCGGCGGCGGTGGTGCGCCCGTGGTGATACTTGTACTTGGCTTTTAT
CTTCGCGTCCAGCTTGTAGTATCCTTCCGTCCGCGCCGACCCACTCGAGTGACCCTGTAG
GTCCTCGTAGATGTTGTTGTGCCGCTTGGACTTCTTCCTGGGCGGGCCGTAGAGCACGTC
GGTGGGCGGGTGGTCGACCCAGTGCGTGTCGTTGAGCCAGTAGCCGTGCGCGTCGCCGCT
GAGCAGCGCCTCGTACGCGCGGCGCAGGTACTCCACGTCCTCGCGGTCGATGCCGCGCGT
CAGGAACTCGTACATCACCGTCATCTCGCCCATGATCTCGCGCGCCGCGAACTGCACGCC
CCCCGCCGCCGGCTCGTGTAGCTTGTTTTGTATCTCAGATAATTTTTTGGTTTCATGTTT
CCGTTTATAAGGTCTCTTCTCTTGGTTACTGGATTCAGTTTGCGGTGGCTCCGGGACAGG
AGAGGTGCTTTCTGGTTCGGCCATCCATGTGTAACCGTGATCATGATGCAGATGGTTGGA
GAGTCTCGGTTCTGCGTCGGGCGGCGGCCTGCAGTACGAGTGGTCGAGCGCCACTTGAGA
CGCTTGAGATGCCTGCGACAGTTGTGACGCCTGGGACGCTTGTGACGTCTGTGACTGCGG
CGACCACGTCTCCGACACAGCGCTGCTGCCATCCTTAACACCATTAACTCCATTGGCGGT
CTCGGTGTTACTGTCGCTTGCGGAGATAGCTCGCTGTCGTTTTTCAATTTTCTTAGAGCG
TCGTTCCTTCTTCCTGCGACTTTTGAGCGTCTCGTCCTCCGAAGTGATCTCGCCATCTTC
GATTTCCGTGTCCGGCTTCTTCTCGGGAGATTTAATGTGATTCTTAATTGGACTGCTTAT
GGGTGCATCTGGTTTGCTATCGTGTGTACTGTCGTCGGGAGGTTTCTCAGGCTGCGGCTG
GGTGTCGACTTCCATCTTCTGTCGTTGTTCTTCCAAGAATTCTCGTTCTATTTGTTCCAT
GTACTCGGTGTTTCGTCTTCGCCTTTCCTGATATTCCCTCTCTTCTTCAGAGTCAGAGTA
TACTCGATCCAGTATCAAATCTCGTGGTTCTTCAGGAGACATGATGGGCGATCCTAACCT
CTCTTCCGTGTCTGACGCTTCTACAGGCGGTATTGGAGTCTTTTCTCTCATTCTGCTCTC
CTCTTCGCTGTCAGAAGACGAGTAGACACGTCTTAACCTTTCTTTATTTGACACAACCTT
GAGCTCAGCCTCGTCTAGTTCTGAATCGTCATCAGTATCAGAATATATCCGGGGCGCGGG
ACCCTTGTGTTCCGACTCTGATTCCTCCGACTCATCCGACCTACTTGATGATGATGATGA
TGACCTAGATGAACTGCTGGACTGTCGTCTCCTACTCCTAGACAAATATGATCCTGTACT
TCTGTTCCTAGGGCTGGTCGGAACTTCTTTTTCTTCGTCCGAATGCTGCACCATCTCTTC
CTGATCACTGAGCCTCTTCGACGAGTCCTCATCCATAAGAACAGGCGAAGGAATCTTCCT
TTTCTTTCTAAAGCTTGGCATTTTGGGTATAGCAGCGCGCAAGCCCAGACCTATACCAAT
ACCGTAACCACCCAGATCTAGACCCAGCTCTCGAGACTCCATTATCGACTTTATAGAATC
CACAGCTTCCTCTTTTTTATTGGAAATATCCTGTAAAGGTTGGTTATCTTCTTTAGGCTT
GACCTGTCTCATTTTCCTGCTCTGTTCGTCCCACCAAACCTCGAAGTTTTTGAAGGCAGT
GTTCTCTATCATTTTCTTGTTGAAGTCTTTCTTCAGTATTTGTTTTAACTCAGCCGTGAC
TCGTTCTATTACGCTGTTTATCGTTGAAAAGTGGGGATTATCTAATTCCTGCGCATGTGT
CTGCGGGCCGCTGTAGGTGGCGTAGTGCGTCGGCAGCACGGGCGGCGGGAAGCCCGGCGC
CGCACCGTACGGCACCTCGCCCGCTGCGCCCGCCCGGTACGGGGGGGGCGGGTACGCTGT
ATGAGGCCACATCGGCGTCTGATAGTAGTGCGGATGTGGCGGATGTGGTGGGTAGTAGTA
CGCCTCTGCGGGCACTTGCTCTTCAATTTTAGCCTCCGTTGAAGATAACGATGACAGAGA
CATCTGATCGTCATCTAAGTTGTCTTGGTCGCGGTCTTGACTGGGCGGCGCGGCCGGAGA
GCGTCTCGGCTCCTCGCCCGTCAGCAGCTCGTCTTCGGACGACGATATGTCGGATCCGAT
CTTGTCTATCGCCGGAAGTAGCTTGCGTTGTTGCTGTCTCGCTTTCTTAGCCACGGTTAT
CTTGAGACACTCCAAATATAATTCTCTGGATAAGTACGGCGAGGGTGTTGTGGACAAGGG
CTCGGGGTCGACTTCGCTTGTTTGCGAAACAGATACTATGCTCTCTCTGTCTTCACTGGC
TGAACCTTCATCGTCAGTGGGAGGGTTGTGTGCATCAAGATCTGGTATTTTCGAAGGCAA
TCTATCATCGTCTTCTTCTTCCGAAGACATTCCTAGAGACAAGAAAGGAGGGGCGAGCCC
CCCACCGCCGGTAGCGCCTTTGAGCAACATCGCTATTCTAGTATCAAGATCAACATTCTT
AGATTCTTCAGCAGGAGGTGGAGGCTTCGTCTCAGGTTCTTTGCCGTCTGCCTCGTCTTC
GGGAGGATGAGGTTCCACTACATCAATCACTTTATTCTCAACCGACGGCGTTTCCTTATG
ATTGTCGAGTCCCGGGGTCGGCTCGGGCGAGCGTTCCGGGGGCGCGGTGACGGCGGCGGG
GGGCGGGTGCGGCGCGGGG
(3559 bp)

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