SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/221677
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3031 A_BomoEE_comp1029412_c0_seq1
807bp
FPKM:0.24 TPM:0.42
3032 A_BomoEE_comp1029413_c0_seq1
325bp
FPKM:0.43 TPM:0.74
3033 A_BomoEE_comp1029420_c0_seq1
317bp
FPKM:0.39 TPM:0.69
3034 A_BomoEE_comp1029429_c0_seq1
231bp
 Glycos_transf_1,_partial_[uncultured_Desulfurivibrio_sp.]
FPKM:0.64 TPM:1.11
3035 A_BomoEE_comp1029436_c0_seq1
419bp
FPKM:0.26 TPM:0.46
3036 A_BomoEE_comp1029464_c0_seq1
337bp
FPKM:0.35 TPM:0.60
3037 A_BomoEE_comp1029466_c0_seq1
488bp
FPKM:0.33 TPM:0.58
3038 A_BomoEE_comp1029469_c0_seq1
494bp
FPKM:0.35 TPM:0.62
3039 A_BomoEE_comp1029476_c0_seq1
373bp
FPKM:0.20 TPM:0.35
3040 A_BomoEE_comp1029477_c0_seq1
1781bp
 translation_elongation_factor_EF-1_alpha/Tu_[Culex_quinquefasciatus]
FPKM:0.22 TPM:0.38
3041 A_BomoEE_comp1029488_c0_seq1
521bp
FPKM:0.30 TPM:0.53
3042 A_BomoEE_comp102948_c0_seq1
320bp
FPKM:4.62 TPM:8.07
3043 A_BomoEE_comp10294_c0_seq1
400bp
FPKM:0.21 TPM:0.37
3044 A_BomoEE_comp1029506_c0_seq1
295bp
FPKM:0.26 TPM:0.46
3045 A_BomoEE_comp1029509_c0_seq1
457bp
 PREDICTED:_nuclear_factor_erythroid_2-related_factor_2_isoform_X3_[Melopsittacus_undulatus]
FPKM:0.37 TPM:0.65
3046 A_BomoEE_comp1029523_c0_seq1
483bp
FPKM:0.34 TPM:0.59
3047 A_BomoEE_comp1029526_c0_seq1
296bp
 aspartate_aminotransferase_[Nocardia_jinanensis]
FPKM:0.33 TPM:0.57
3048 A_BomoEE_comp1029529_c0_seq1
362bp
FPKM:0.21 TPM:0.37
3049 A_BomoEE_comp102952_c0_seq1
1312bp
 PREDICTED:_DNA_topoisomerase_2-binding_protein_1_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
FPKM:9.27 TPM:16.17
3050 A_BomoEE_comp1029561_c0_seq1
373bp
FPKM:0.32 TPM:0.57
3051 A_BomoEE_comp1029570_c0_seq1
541bp
FPKM:0.22 TPM:0.38
3052 A_BomoEE_comp1029577_c0_seq1
397bp
 TRS85-like_protein_[Zootermopsis_nevadensis]
FPKM:0.29 TPM:0.51
3053 A_BomoEE_comp1029585_c0_seq1
317bp
FPKM:0.34 TPM:0.59
3054 A_BomoEE_comp102958_c0_seq1
370bp
FPKM:1.73 TPM:3.02
3055 A_BomoEE_comp1029595_c0_seq1
237bp
 hypothetical_protein_DICPUDRAFT_97228_[Dictyostelium_purpureum]
FPKM:0.12 TPM:0.21
3056 A_BomoEE_comp10295_c0_seq1
504bp
 PREDICTED:_G-type_lectin_S-receptor-like_serine/threonine-protein_kinase_B120_isoform_X3_[Fragaria_vesca_subsp._vesca]
FPKM:0.01 TPM:0.02
3057 A_BomoEE_comp10295_c0_seq2
580bp
 PREDICTED:_G-type_lectin_S-receptor-like_serine/threonine-protein_kinase_B120_isoform_X3_[Fragaria_vesca_subsp._vesca]
FPKM:0.21 TPM:0.37
3058 A_BomoEE_comp1029600_c0_seq1
467bp
 PREDICTED:_runt-related_transcription_factor_1-like_[Papilio_polytes]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0002062 P chondrocyte differentiation
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0030097 P hemopoiesis
GO:0030182 P neuron differentiation
GO:0042826 F histone deacetylase binding
GO:0044344 P cellular response to fibroblast growth factor stimulus
GO:0045667 P regulation of osteoblast differentiation
GO:0045778 P positive regulation of ossification
FPKM:0.28 TPM:0.48
3059 A_BomoEE_comp1029615_c0_seq1
231bp
FPKM:0.13 TPM:0.22
3060 A_BomoEE_comp1029619_c0_seq1
286bp
FPKM:0.21 TPM:0.37
previous next from show/221677

- SilkBase 1999-2023 -