SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp1029600_c0_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_runt-related_transcription_factor_1-like_[Papilio_polytes]
Ontology
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0002062 P chondrocyte differentiation
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0030097 P hemopoiesis
GO:0030182 P neuron differentiation
GO:0042826 F histone deacetylase binding
GO:0044344 P cellular response to fibroblast growth factor stimulus
GO:0045667 P regulation of osteoblast differentiation
GO:0045778 P positive regulation of ossification
Transcript
Level		FPKM:0.28 TPM:0.48
ORF EntryO_BomoEE92366_internal:A_BomoEE_comp1029600_c0_seq1
Sequence
(Nucleotide)
TATTGGATTATCTGACGTCACGTCGTTTTCGTGAGGCGGTGGGGGTCCTGGGGGCTGTGT
ATGCGCTGGAGGCAGCACGTGTGGAGTGAAGTGCGGATGTGCTGGCAGAATTGGTGGGGG
GTAATGCCGGGCTAGCGCTCCCCATTCGCCTCCAGGTAGACCAGCCAACTGATGAGCTAT
GCCTGACAATTTAAAAGGTAGTGATCCCATCAAAGGATCCGGAGCAAACCTGGGCCCGAA
ATGGAAAGGATGGAAACCGTGGTGTCGAGTCTTGGACCTCGGCTCTCTGGGGCCGTCGAC
CGTGACTTTGATGGCTTTTTGGTACGTCGCGACTTGCGGAGGAGAAGTTGCCAGCATTAT
CGTTAGAGTAAAAGATTTCCCTCTTCCGCTTCGACCAACGAATCTCAGATCGTTGAATTT
AGCCACCTGATTCTTCATTACTGCAGTACAGTTTCTCAGTTCAGCCG
(467 bp)

- SilkBase 1999-2023 -