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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6841 A_BomaMG_comp16368_c0_seq1
552bp
FPKM:1.74 TPM:1.61
6842 A_BomaMG_comp16369_c0_seq1
342bp
FPKM:1.90 TPM:1.76
6843 A_BomaMG_comp16369_c1_seq1
342bp
FPKM:1.47 TPM:1.37
6844 A_BomaMG_comp16370_c0_seq1
559bp
PREDICTED:_uncharacterized_protein_LOC101737183_[Bombyx_mori]
FPKM:2.42 TPM:2.24
6845 A_BomaMG_comp16370_c1_seq1
342bp
FPKM:1.68 TPM:1.56
6846 A_BomaMG_comp16372_c0_seq1
992bp
FPKM:1.59 TPM:1.47
6847 A_BomaMG_comp163735_c0_seq1
270bp
PREDICTED:_uncharacterized_protein_LOC106131712_[Amyelois_transitella]
FPKM:1.11 TPM:1.03
6848 A_BomaMG_comp16373_c0_seq1
667bp
PREDICTED:_dedicator_of_cytokinesis_protein_3-like,_partial_[Amyelois_transitella]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007264 P small GTPase mediated signal transduction
GO:0017124 F SH3 domain binding
GO:0043547 P positive regulation of GTPase activity
FPKM:1.60 TPM:1.49
6849 A_BomaMG_comp163740_c0_seq1
583bp
PREDICTED:_DNA-directed_RNA_polymerase_I_subunit_RPA2_[Papilio_polytes]
GO:0001054 F RNA polymerase I activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005736 C RNA polymerase I complex
GO:0006351 P transcription, DNA-templated
GO:0006360 P transcription by RNA polymerase I
GO:0016049 P cell growth
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0022008 P neurogenesis
GO:0032549 F ribonucleoside binding
GO:0045793 P positive regulation of cell size
GO:0046872 F metal ion binding
FPKM:1.77 TPM:1.64
6850 A_BomaMG_comp163741_c0_seq1
423bp
PREDICTED:_actin_filament-associated_protein_1-like_1_[Geospiza_fortis]
FPKM:0.70 TPM:0.65
6851 A_BomaMG_comp16374_c0_seq1
347bp
PREDICTED:_uncharacterized_protein_LOC106132254_[Amyelois_transitella]
FPKM:2.04 TPM:1.89
6852 A_BomaMG_comp16376_c0_seq1
540bp
exopolysaccharide_biosynthesis_protein_[Rhizobium_sp._Root482]
FPKM:1.61 TPM:1.49
6853 A_BomaMG_comp163773_c0_seq1
406bp
PREDICTED:_putative_ATP-dependent_RNA_helicase_DHX30_[Bombyx_mori]
FPKM:2.27 TPM:2.10
6854 A_BomaMG_comp16377_c0_seq1
1016bp
PREDICTED:_reticulocalbin-2_[Papilio_machaon]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
FPKM:5.15 TPM:4.77
6855 A_BomaMG_comp16378_c0_seq1
325bp
PREDICTED:_protein_kinase_C_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002281 P macrophage activation involved in immune response
GO:0002376 P immune system process
GO:0003785 F actin monomer binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0004699 F calcium-independent protein kinase C activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007202 P activation of phospholipase C activity
GO:0008047 F enzyme activator activity
GO:0010634 P positive regulation of epithelial cell migration
GO:0010763 P positive regulation of fibroblast migration
GO:0010811 P positive regulation of cell-substrate adhesion
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0019216 P regulation of lipid metabolic process
GO:0019899 F enzyme binding
GO:0030168 P platelet activation
GO:0030546 F signaling receptor activator activity
GO:0030838 P positive regulation of actin filament polymerization
GO:0031397 P negative regulation of protein ubiquitination
GO:0031663 P lipopolysaccharide-mediated signaling pathway
GO:0032024 P positive regulation of insulin secretion
GO:0032230 P positive regulation of synaptic transmission, GABAergic
GO:0032467 P positive regulation of cytokinesis
GO:0035276 F ethanol binding
GO:0035556 P intracellular signal transduction
GO:0035641 P locomotory exploration behavior
GO:0035669 P TRAM-dependent toll-like receptor 4 signaling pathway
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043278 P response to morphine
GO:0043410 P positive regulation of MAPK cascade
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050730 P regulation of peptidyl-tyrosine phosphorylation
GO:0050996 P positive regulation of lipid catabolic process
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051279 P regulation of release of sequestered calcium ion into cytosol
GO:0051301 P cell division
GO:0061178 P regulation of insulin secretion involved in cellular response to glucose stimulus
GO:0070257 P positive regulation of mucus secretion
GO:0071361 P cellular response to ethanol
GO:0071380 P cellular response to prostaglandin E stimulus
GO:0071456 P cellular response to hypoxia
GO:0071889 F 14-3-3 protein binding
GO:0071944 C cell periphery
GO:0090303 P positive regulation of wound healing
GO:2000273 P positive regulation of signaling receptor activity
GO:2000650 P negative regulation of sodium ion transmembrane transporter activity
GO:2001031 P positive regulation of cellular glucuronidation
FPKM:1.88 TPM:1.74
6856 A_BomaMG_comp16378_c1_seq1
239bp
PREDICTED:_protein_kinase_C_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
FPKM:0.54 TPM:0.50
6857 A_BomaMG_comp16379_c0_seq1
404bp
FPKM:1.52 TPM:1.41
6858 A_BomaMG_comp16380_c0_seq1
482bp
hypothetical_protein_[Mesorhizobium_erdmanii]
FPKM:1.92 TPM:1.78
6859 A_BomaMG_comp163828_c0_seq1
511bp
lysozyme_[Manduca_sexta]
GO:0003796 F lysozyme activity
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0019835 P cytolysis
GO:0042742 P defense response to bacterium
FPKM:1.85 TPM:1.71
6860 A_BomaMG_comp16383_c0_seq1
1068bp
PREDICTED:_keratin-associated_protein_16-1-like_isoform_X2_[Mus_musculus]
FPKM:1.91 TPM:1.77
6861 A_BomaMG_comp16384_c0_seq1
1163bp
PREDICTED:_WD_repeat-containing_protein_44_[Bombyx_mori]
FPKM:1.92 TPM:1.78
6862 A_BomaMG_comp16384_c0_seq2
720bp
PREDICTED:_WD_repeat-containing_protein_44_[Bombyx_mori]
FPKM:2.65 TPM:2.46
6863 A_BomaMG_comp163869_c0_seq1
415bp
FPKM:0.73 TPM:0.67
6864 A_BomaMG_comp16386_c0_seq1
375bp
PREDICTED:_phosphatidylinositol_3-kinase_catalytic_subunit_type_3_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000166 F nucleotide binding
GO:0000910 P cytokinesis
GO:0004672 F protein kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006914 P autophagy
GO:0007032 P endosome organization
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0016301 F kinase activity
GO:0016303 F 1-phosphatidylinositol-3-kinase activity
GO:0016310 P phosphorylation
GO:0016485 P protein processing
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030496 C midbody
GO:0031410 C cytoplasmic vesicle
GO:0032465 P regulation of cytokinesis
GO:0035004 F phosphatidylinositol 3-kinase activity
GO:0035032 C phosphatidylinositol 3-kinase complex, class III
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0042149 P cellular response to glucose starvation
GO:0043201 P response to leucine
GO:0045022 P early endosome to late endosome transport
GO:0045335 C phagocytic vesicle
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0050708 P regulation of protein secretion
GO:0051301 P cell division
FPKM:2.28 TPM:2.11
6865 A_BomaMG_comp16387_c0_seq1
208bp
FPKM:6.36 TPM:5.89
6866 A_BomaMG_comp16389_c0_seq1
1927bp
PREDICTED:_septin-7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003779 F actin binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005940 C septin ring
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0031105 C septin complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032154 C cleavage furrow
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0045171 C intercellular bridge
GO:0045172 C germline ring canal
GO:0051301 P cell division
GO:0070938 C contractile ring
FPKM:2.99 TPM:2.77
6867 A_BomaMG_comp16389_c0_seq2
1833bp
PREDICTED:_septin-7_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003779 F actin binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005940 C septin ring
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0031105 C septin complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032154 C cleavage furrow
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0045171 C intercellular bridge
GO:0045172 C germline ring canal
GO:0051301 P cell division
GO:0070938 C contractile ring
FPKM:2.02 TPM:1.87
6868 A_BomaMG_comp16390_c0_seq1
605bp
PREDICTED:_cleavage_and_polyadenylation_specificity_factor_subunit_1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0019899 F enzyme binding
GO:0035925 F mRNA 3'-UTR AU-rich region binding
FPKM:1.92 TPM:1.78
6869 A_BomaMG_comp16391_c0_seq1
555bp
nucleolar_protein_family_A_member_2_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0006364 P rRNA processing
GO:0009267 P cellular response to starvation
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0031118 P rRNA pseudouridine synthesis
GO:0042254 P ribosome biogenesis
FPKM:2.45 TPM:2.27
6870 A_BomaMG_comp16392_c0_seq1
350bp
FPKM:2.61 TPM:2.42
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