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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6781 A_BomaMG_comp163205_c0_seq1
303bp
PREDICTED:_protein_pigeon_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:3.59 TPM:3.32
6782 A_BomaMG_comp16320_c0_seq1
1206bp
PREDICTED:_fragile_X_mental_retardation_syndrome-related_protein_1_homolog_A_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0030154 P cell differentiation
GO:0033592 F RNA strand annealing activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:2000637 P positive regulation of gene silencing by miRNA
FPKM:23.35 TPM:21.62
6783 A_BomaMG_comp16320_c0_seq2
1188bp
PREDICTED:_fragile_X_mental_retardation_syndrome-related_protein_1_homolog_A_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0030154 P cell differentiation
GO:0033592 F RNA strand annealing activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:2000637 P positive regulation of gene silencing by miRNA
FPKM:4.07 TPM:3.77
6784 A_BomaMG_comp16321_c0_seq1
1169bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_34_[Papilio_xuthus]
GO:0000124 C SAGA complex
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016055 P Wnt signaling pathway
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0071108 P protein K48-linked deubiquitination
GO:0090263 P positive regulation of canonical Wnt signaling pathway
FPKM:2.02 TPM:1.87
6785 A_BomaMG_comp16322_c0_seq1
234bp
FPKM:1.16 TPM:1.07
6786 A_BomaMG_comp16322_c1_seq1
281bp
PREDICTED:_myosin-binding_protein_C,_fast-type_[Pseudopodoces_humilis]
FPKM:1.00 TPM:0.93
6787 A_BomaMG_comp163233_c0_seq1
358bp
PREDICTED:_cryptochrome-1_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003914 F DNA (6-4) photolyase activity
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016829 F lyase activity
FPKM:2.30 TPM:2.13
6788 A_BomaMG_comp16323_c0_seq1
273bp
hypothetical_protein_PILCRDRAFT_805525_[Piloderma_croceum_F_1598]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:1.44 TPM:1.33
6789 A_BomaMG_comp16324_c0_seq1
432bp
FPKM:1.76 TPM:1.63
6790 A_BomaMG_comp16324_c1_seq1
430bp
FPKM:1.23 TPM:1.14
6791 A_BomaMG_comp163255_c0_seq1
655bp
N-acetyltransferase_6_[Papilio_machaon]
GO:0005737 C cytoplasm
GO:0008080 F N-acetyltransferase activity
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
FPKM:2.07 TPM:1.92
6792 A_BomaMG_comp16325_c0_seq1
828bp
FPKM:1.65 TPM:1.53
6793 A_BomaMG_comp16325_c0_seq2
301bp
PREDICTED:_5'-AMP-activated_protein_kinase_subunit_gamma-3_[Leptonychotes_weddellii]
FPKM:0.15 TPM:0.14
6794 A_BomaMG_comp163261_c0_seq1
430bp
FPKM:0.82 TPM:0.76
6795 A_BomaMG_comp16326_c0_seq1
446bp
PREDICTED:_ral_GTPase-activating_protein_subunit_beta-like_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005829 C cytosol
GO:0032484 P Ral protein signal transduction
GO:0032880 P regulation of protein localization
GO:0046982 F protein heterodimerization activity
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0060178 P regulation of exocyst localization
GO:0061024 P membrane organization
GO:0090630 P activation of GTPase activity
FPKM:2.82 TPM:2.61
6796 A_BomaMG_comp16327_c0_seq1
234bp
FPKM:6.36 TPM:5.89
6797 A_BomaMG_comp163281_c0_seq1
258bp
glycoside_hydrolase_[Bacteroides_ovatus]
FPKM:2.54 TPM:2.35
6798 A_BomaMG_comp16328_c0_seq1
734bp
fibroin_L-chain_[Bombyx_mandarina]
GO:0005576 C extracellular region
FPKM:0.81 TPM:0.75
6799 A_BomaMG_comp16328_c0_seq2
946bp
fibroin_L-chain_[Bombyx_mandarina]
GO:0005576 C extracellular region
FPKM:0.92 TPM:0.85
6800 A_BomaMG_comp16329_c0_seq1
617bp
PREDICTED:_ataxin-2-like_protein_[Bombyx_mori]
FPKM:0.77 TPM:0.71
6801 A_BomaMG_comp16329_c0_seq2
993bp
PREDICTED:_ataxin-2-like_protein_[Bombyx_mori]
FPKM:0.17 TPM:0.16
6802 A_BomaMG_comp1632_c0_seq1
216bp
FPKM:2.33 TPM:2.16
6803 A_BomaMG_comp16331_c0_seq1
389bp
hypothetical_protein_[Paenibacillus_algorifonticola]
FPKM:1.63 TPM:1.51
6804 A_BomaMG_comp163328_c0_seq1
214bp
hypothetical_protein_[Mycobacterium_aurum]
FPKM:2.42 TPM:2.24
6805 A_BomaMG_comp16332_c0_seq1
556bp
FPKM:1.90 TPM:1.76
6806 A_BomaMG_comp16333_c0_seq1
705bp
FPKM:1.94 TPM:1.80
6807 A_BomaMG_comp16334_c0_seq1
433bp
Sodium-coupled_neutral_amino_acid_transporter_9-like_[Exaiptasia_pallida]
FPKM:1.48 TPM:1.37
6808 A_BomaMG_comp16334_c1_seq1
579bp
putative_KRAB_box_and_zinc_finger_C2H2_type_domain_containing_protein_[Danaus_plexippus]
GO:0002437 P inflammatory response to antigenic stimulus
GO:0002829 P negative regulation of type 2 immune response
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0045629 P negative regulation of T-helper 2 cell differentiation
GO:0046872 F metal ion binding
FPKM:1.88 TPM:1.74
6809 A_BomaMG_comp16335_c0_seq1
478bp
PREDICTED:_neurofilament_heavy_polypeptide-like_isoform_X3_[Bombyx_mori]
FPKM:0.35 TPM:0.32
6810 A_BomaMG_comp16335_c0_seq2
535bp
PREDICTED:_neurofilament_heavy_polypeptide-like_isoform_X3_[Bombyx_mori]
FPKM:1.34 TPM:1.24
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