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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6691 A_BomaMG_comp162598_c0_seq1
637bp
FPKM:1.86 TPM:1.72
6692 A_BomaMG_comp1625_c0_seq1
205bp
integument_esterase_1_precursor_[Bombyx_mori]
FPKM:0.97 TPM:0.90
6693 A_BomaMG_comp16260_c0_seq1
462bp
FPKM:1.81 TPM:1.68
6694 A_BomaMG_comp16260_c1_seq1
411bp
PREDICTED:_sister_chromatid_cohesion_protein_PDS5_homolog_A_isoform_X2_[Solanum_lycopersicum]
FPKM:2.36 TPM:2.19
6695 A_BomaMG_comp162617_c0_seq1
439bp
FPKM:2.24 TPM:2.07
6696 A_BomaMG_comp16261_c0_seq1
739bp
FPKM:2.00 TPM:1.86
6697 A_BomaMG_comp16261_c1_seq1
207bp
FPKM:1.85 TPM:1.72
6698 A_BomaMG_comp16262_c0_seq1
773bp
PREDICTED:_protein_furry_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008407 P chaeta morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030427 C site of polarized growth
GO:0035316 P non-sensory hair organization
GO:0035317 P imaginal disc-derived wing hair organization
GO:0042052 P rhabdomere development
GO:0044297 C cell body
GO:0045177 C apical part of cell
GO:0045860 P positive regulation of protein kinase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048601 P oocyte morphogenesis
GO:0048800 P antennal morphogenesis
GO:0048814 P regulation of dendrite morphogenesis
GO:0050773 P regulation of dendrite development
GO:0070593 P dendrite self-avoidance
GO:0090527 P actin filament reorganization
FPKM:1.95 TPM:1.80
6699 A_BomaMG_comp16262_c1_seq1
241bp
PREDICTED:_protein_furry_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008407 P chaeta morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030427 C site of polarized growth
GO:0035316 P non-sensory hair organization
GO:0035317 P imaginal disc-derived wing hair organization
GO:0042052 P rhabdomere development
GO:0044297 C cell body
GO:0045177 C apical part of cell
GO:0045860 P positive regulation of protein kinase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048601 P oocyte morphogenesis
GO:0048800 P antennal morphogenesis
GO:0048814 P regulation of dendrite morphogenesis
GO:0050773 P regulation of dendrite development
GO:0070593 P dendrite self-avoidance
GO:0090527 P actin filament reorganization
FPKM:2.09 TPM:1.94
6700 A_BomaMG_comp162640_c0_seq1
477bp
FPKM:1.72 TPM:1.59
6701 A_BomaMG_comp16265_c0_seq1
266bp
FPKM:4.26 TPM:3.94
6702 A_BomaMG_comp16266_c0_seq1
398bp
FPKM:2.35 TPM:2.17
6703 A_BomaMG_comp16267_c0_seq1
285bp
PREDICTED:_histone-lysine_N-methyltransferase_EHMT2-like_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0002039 F p53 binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006306 P DNA methylation
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018026 P peptidyl-lysine monomethylation
GO:0018027 P peptidyl-lysine dimethylation
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0051567 P histone H3-K9 methylation
GO:0060992 P response to fungicide
GO:0070734 P histone H3-K27 methylation
GO:0070742 F C2H2 zinc finger domain binding
GO:1901796 P regulation of signal transduction by p53 class mediator
FPKM:1.93 TPM:1.79
6704 A_BomaMG_comp16268_c0_seq1
578bp
FPKM:2.22 TPM:2.06
6705 A_BomaMG_comp16269_c0_seq1
246bp
FPKM:1.96 TPM:1.81
6706 A_BomaMG_comp16269_c1_seq1
212bp
PREDICTED:_protein_kinase_C_epsilon_type-like_isoform_X2_[Cyprinodon_variegatus]
FPKM:2.52 TPM:2.33
6707 A_BomaMG_comp1626_c0_seq1
206bp
PREDICTED:_NADH_dehydrogenase_[ubiquinone]_1_beta_subcomplex_subunit_3_isoform_X1_[Pteropus_vampyrus]
FPKM:2.84 TPM:2.63
6708 A_BomaMG_comp16270_c0_seq1
402bp
endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:2.46 TPM:2.28
6709 A_BomaMG_comp162715_c0_seq1
1375bp
PREDICTED:_microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
FPKM:1.47 TPM:1.37
6710 A_BomaMG_comp162725_c0_seq1
562bp
FPKM:1.69 TPM:1.57
6711 A_BomaMG_comp16272_c0_seq1
683bp
basic_helix-loop-helix_type_transcription_factor_HLH54F_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001206 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003714 F transcription corepressor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0014707 P branchiomeric skeletal muscle development
GO:0046983 F protein dimerization activity
GO:0060021 P roof of mouth development
GO:0060539 P diaphragm development
FPKM:2.09 TPM:1.94
6712 A_BomaMG_comp16273_c0_seq1
855bp
FPKM:1.21 TPM:1.12
6713 A_BomaMG_comp16274_c0_seq1
1105bp
FPKM:1.72 TPM:1.59
6714 A_BomaMG_comp16274_c1_seq1
255bp
FPKM:2.19 TPM:2.03
6715 A_BomaMG_comp162758_c0_seq1
1214bp
PREDICTED:_structural_maintenance_of_chromosomes_protein_6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0030915 C Smc5-Smc6 complex
GO:0033676 F double-stranded DNA helicase activity
GO:0051321 P meiotic cell cycle
FPKM:1.77 TPM:1.64
6716 A_BomaMG_comp16275_c0_seq1
1447bp
PREDICTED:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0035428 P hexose transmembrane transport
GO:0046323 P glucose import
GO:0055085 P transmembrane transport
GO:1904659 P glucose transmembrane transport
FPKM:1.58 TPM:1.46
6717 A_BomaMG_comp162779_c0_seq1
255bp
Mitochondrial_sodium/hydrogen_exchanger_NHA2_[Papilio_xuthus]
FPKM:2.63 TPM:2.43
6718 A_BomaMG_comp16277_c0_seq1
1984bp
PREDICTED:_exonuclease_mut-7_homolog_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0006139 P nucleobase-containing compound metabolic process
GO:0008408 F 3'-5' exonuclease activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.65 TPM:1.53
6719 A_BomaMG_comp16278_c0_seq1
438bp
FPKM:2.25 TPM:2.08
6720 A_BomaMG_comp16279_c0_seq1
315bp
FPKM:3.03 TPM:2.80
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