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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6421 A_BomaMG_comp160824_c0_seq1
786bp
PREDICTED:_uncharacterized_protein_LOC106136198_[Amyelois_transitella]
GO:0000209 P protein polyubiquitination
GO:0005575 C cellular_component
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
FPKM:1.85 TPM:1.71
6422 A_BomaMG_comp160826_c0_seq1
405bp
FPKM:2.28 TPM:2.11
6423 A_BomaMG_comp160829_c0_seq1
218bp
putative_rab_geranylgeranyl_transferase_escort_protein_[Phaeomoniella_chlamydospora]
FPKM:3.75 TPM:3.47
6424 A_BomaMG_comp16082_c0_seq1
481bp
FPKM:2.60 TPM:2.41
6425 A_BomaMG_comp16084_c0_seq1
559bp
FPKM:2.24 TPM:2.08
6426 A_BomaMG_comp16085_c0_seq1
536bp
PREDICTED:_protein_Peter_pan_[Papilio_machaon]
GO:0000027 P ribosomal large subunit assembly
GO:0002164 P larval development
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007275 P multicellular organism development
GO:0007292 P female gamete generation
GO:0007444 P imaginal disc development
GO:0019843 F rRNA binding
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030687 C preribosome, large subunit precursor
GO:0048477 P oogenesis
FPKM:1.63 TPM:1.51
6427 A_BomaMG_comp16085_c1_seq1
1047bp
PREDICTED:_suppressor_of_SWI4_1_homolog_[Amyelois_transitella]
GO:0000027 P ribosomal large subunit assembly
GO:0002164 P larval development
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007275 P multicellular organism development
GO:0007292 P female gamete generation
GO:0007444 P imaginal disc development
GO:0019843 F rRNA binding
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030687 C preribosome, large subunit precursor
GO:0048477 P oogenesis
FPKM:1.72 TPM:1.59
6428 A_BomaMG_comp16087_c0_seq1
213bp
ATP_synthase_F0_subunit_6_(mitochondrion)_[Liobagrus_marginatus]
FPKM:0.82 TPM:0.76
6429 A_BomaMG_comp16088_c0_seq1
282bp
FPKM:0.33 TPM:0.31
6430 A_BomaMG_comp16088_c1_seq1
523bp
hypothetical_protein_H101_06299,_partial_[Trichophyton_interdigitale_H6]
FPKM:2.18 TPM:2.02
6431 A_BomaMG_comp16090_c0_seq1
206bp
PREDICTED:_uncharacterized_protein_LOC106127128_[Papilio_xuthus]
FPKM:4.73 TPM:4.38
6432 A_BomaMG_comp16090_c1_seq1
2116bp
FPKM:1.36 TPM:1.26
6433 A_BomaMG_comp16091_c0_seq1
445bp
FPKM:2.83 TPM:2.62
6434 A_BomaMG_comp16092_c0_seq1
589bp
PREDICTED:_uncharacterized_protein_LOC105204256_[Solenopsis_invicta]
FPKM:1.50 TPM:1.39
6435 A_BomaMG_comp16092_c1_seq1
334bp
PREDICTED:_uncharacterized_protein_LOC105204256_[Solenopsis_invicta]
FPKM:2.44 TPM:2.26
6436 A_BomaMG_comp160930_c0_seq1
324bp
PREDICTED:_uncharacterized_protein_LOC106100055_[Papilio_polytes]
FPKM:3.08 TPM:2.85
6437 A_BomaMG_comp160934_c0_seq1
342bp
FPKM:2.53 TPM:2.34
6438 A_BomaMG_comp16093_c0_seq1
1261bp
PREDICTED:_U1_small_nuclear_ribonucleoprotein_A_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005685 C U1 snRNP
GO:0005686 C U2 snRNP
GO:0006397 P mRNA processing
GO:0007539 P primary sex determination, soma
GO:0008266 F poly(U) RNA binding
GO:0008380 P RNA splicing
GO:0017069 F snRNA binding
GO:0019099 P female germ-line sex determination
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0030619 F U1 snRNA binding
GO:0030620 F U2 snRNA binding
GO:0035614 F snRNA stem-loop binding
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0048477 P oogenesis
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0097158 F pre-mRNA intronic pyrimidine-rich binding
FPKM:4.55 TPM:4.21
6439 A_BomaMG_comp16094_c0_seq1
339bp
FPKM:3.22 TPM:2.98
6440 A_BomaMG_comp16095_c0_seq1
1375bp
PREDICTED:_origin_recognition_complex_subunit_3_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005664 C nuclear origin of replication recognition complex
GO:0006260 P DNA replication
GO:0008150 P biological_process
FPKM:1.67 TPM:1.55
6441 A_BomaMG_comp16095_c0_seq2
795bp
PREDICTED:_origin_recognition_complex_subunit_3_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005664 C nuclear origin of replication recognition complex
GO:0006260 P DNA replication
FPKM:0.00 TPM:0.00
6442 A_BomaMG_comp16095_c0_seq3
795bp
PREDICTED:_origin_recognition_complex_subunit_3_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005664 C nuclear origin of replication recognition complex
GO:0006260 P DNA replication
FPKM:1.32 TPM:1.23
6443 A_BomaMG_comp16096_c0_seq1
250bp
hypothetical_protein_[Staphylococcus_sciuri]
FPKM:2.79 TPM:2.59
6444 A_BomaMG_comp16097_c0_seq1
945bp
FPKM:2.26 TPM:2.09
6445 A_BomaMG_comp16097_c1_seq1
247bp
FPKM:1.45 TPM:1.34
6446 A_BomaMG_comp16098_c0_seq1
426bp
FPKM:3.33 TPM:3.08
6447 A_BomaMG_comp16098_c1_seq1
427bp
FPKM:2.21 TPM:2.05
6448 A_BomaMG_comp16099_c0_seq1
585bp
PREDICTED:_myb_protein-like_isoform_X3_[Papilio_xuthus]
GO:0003677 F DNA binding
GO:0005634 C nucleus
FPKM:1.38 TPM:1.27
6449 A_BomaMG_comp16099_c0_seq2
333bp
PREDICTED:_myb_transcription_factor_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
FPKM:1.03 TPM:0.95
6450 A_BomaMG_comp1609_c0_seq1
272bp
PREDICTED:_uncharacterized_protein_LOC106688153_[Halyomorpha_halys]
FPKM:1.09 TPM:1.01
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