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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5401 A_BomaMG_comp151897_c0_seq1
982bp
FPKM:1.82 TPM:1.68
5402 A_BomaMG_comp15191_c0_seq1
228bp
FPKM:3.80 TPM:3.52
5403 A_BomaMG_comp15192_c0_seq1
422bp
PREDICTED:_uncharacterized_protein_LOC101739469_[Bombyx_mori]
FPKM:1.83 TPM:1.70
5404 A_BomaMG_comp15193_c0_seq1
224bp
FAD-binding_monooxygenase_[Streptomyces_chartreusis]
FPKM:0.68 TPM:0.63
5405 A_BomaMG_comp15193_c1_seq1
532bp
FPKM:1.26 TPM:1.16
5406 A_BomaMG_comp151940_c0_seq1
575bp
methuselah-like_protein_5_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008340 P determination of adult lifespan
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042594 P response to starvation
FPKM:2.41 TPM:2.23
5407 A_BomaMG_comp151949_c0_seq1
201bp
FPKM:7.39 TPM:6.84
5408 A_BomaMG_comp15194_c0_seq1
683bp
PREDICTED:_trafficking_protein_particle_complex_subunit_10_[Bombyx_mori]
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030008 C TRAPP complex
GO:0030425 C dendrite
GO:0034498 P early endosome to Golgi transport
GO:0042995 C cell projection
GO:0043087 P regulation of GTPase activity
GO:0043204 C perikaryon
GO:0043547 P positive regulation of GTPase activity
GO:1990071 C TRAPPII protein complex
FPKM:0.68 TPM:0.63
5409 A_BomaMG_comp15194_c0_seq2
1028bp
PREDICTED:_trafficking_protein_particle_complex_subunit_10_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0034498 P early endosome to Golgi transport
GO:1990071 C TRAPPII protein complex
FPKM:0.84 TPM:0.78
5410 A_BomaMG_comp15195_c0_seq1
459bp
PREDICTED:_uncharacterized_protein_LOC101735568_[Bombyx_mori]
FPKM:1.96 TPM:1.81
5411 A_BomaMG_comp15196_c0_seq1
591bp
FPKM:1.16 TPM:1.07
5412 A_BomaMG_comp15198_c0_seq1
251bp
PREDICTED:_flap_endonuclease_GEN_homolog_1_isoform_X1_[Callorhinchus_milii]
FPKM:3.22 TPM:2.98
5413 A_BomaMG_comp15199_c0_seq1
392bp
PREDICTED:_centrosomal_protein_of_164_kDa_isoform_X3_[Bombyx_mori]
FPKM:0.81 TPM:0.75
5414 A_BomaMG_comp15199_c1_seq1
775bp
PREDICTED:_centrosomal_protein_of_164_kDa_isoform_X2_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0030030 P cell projection organization
GO:0042384 P cilium assembly
GO:0051301 P cell division
GO:0097539 C ciliary transition fiber
FPKM:1.26 TPM:1.16
5415 A_BomaMG_comp1519_c0_seq1
262bp
gag-like_protein_[Bombyx_mori]
FPKM:2.02 TPM:1.87
5416 A_BomaMG_comp15200_c0_seq1
583bp
PREDICTED:_uncharacterized_protein_LOC105841757_isoform_X1_[Bombyx_mori]
FPKM:1.77 TPM:1.64
5417 A_BomaMG_comp15200_c1_seq1
402bp
PREDICTED:_uncharacterized_protein_LOC106694254,_partial_[Microplitis_demolitor]
GO:0000228 C nuclear chromosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004803 F transposase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0015629 C actin cytoskeleton
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
FPKM:1.54 TPM:1.42
5418 A_BomaMG_comp15201_c0_seq1
235bp
FPKM:3.42 TPM:3.16
5419 A_BomaMG_comp15202_c0_seq1
453bp
hypothetical_protein_L798_04777_[Zootermopsis_nevadensis]
FPKM:1.12 TPM:1.04
5420 A_BomaMG_comp15202_c1_seq1
411bp
FPKM:1.77 TPM:1.64
5421 A_BomaMG_comp15202_c1_seq2
411bp
FPKM:0.00 TPM:0.00
5422 A_BomaMG_comp152038_c0_seq1
332bp
alkene_reductase_[Acidiphilium_sp._JA12-A1]
FPKM:3.14 TPM:2.91
5423 A_BomaMG_comp15203_c0_seq1
260bp
PREDICTED:_protein_tramtrack,_beta_isoform_isoform_X18_[Tribolium_castaneum]
FPKM:1.24 TPM:1.15
5424 A_BomaMG_comp15204_c0_seq1
229bp
Uncharacterized_protein_OBRU01_11137_[Operophtera_brumata]
FPKM:4.36 TPM:4.04
5425 A_BomaMG_comp15205_c0_seq1
596bp
PREDICTED:_neuroblastoma-amplified_sequence-like_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0005783 C endoplasmic reticulum
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031 P protein transport
GO:0043009 P chordate embryonic development
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
FPKM:3.68 TPM:3.41
5426 A_BomaMG_comp15206_c0_seq1
328bp
PREDICTED:_uncharacterized_protein_LOC106707614_[Papilio_machaon]
FPKM:1.84 TPM:1.71
5427 A_BomaMG_comp15207_c0_seq1
296bp
PREDICTED:_zinc_finger_protein_569-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.92 TPM:2.71
5428 A_BomaMG_comp15207_c1_seq1
345bp
PREDICTED:_zinc_finger_protein_569-like_isoform_X2_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:1903507 P negative regulation of nucleic acid-templated transcription
FPKM:1.45 TPM:1.34
5429 A_BomaMG_comp15209_c0_seq1
290bp
FPKM:1.84 TPM:1.71
5430 A_BomaMG_comp15209_c1_seq1
274bp
FPKM:1.07 TPM:0.99
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