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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5371 A_BomaMG_comp15166_c0_seq1
579bp
FPKM:1.28 TPM:1.18
5372 A_BomaMG_comp15166_c1_seq1
545bp
FPKM:1.59 TPM:1.47
5373 A_BomaMG_comp151675_c0_seq1
204bp
hypothetical_protein_SOVF_141430_[Spinacia_oleracea]
FPKM:0.99 TPM:0.91
5374 A_BomaMG_comp15167_c0_seq1
248bp
FPKM:2.86 TPM:2.65
5375 A_BomaMG_comp15167_c1_seq1
268bp
hypothetical_protein_[Legionella_adelaidensis]
FPKM:0.76 TPM:0.70
5376 A_BomaMG_comp15168_c0_seq1
283bp
FPKM:2.29 TPM:2.12
5377 A_BomaMG_comp15168_c1_seq1
351bp
FPKM:0.60 TPM:0.55
5378 A_BomaMG_comp151694_c0_seq1
1268bp
PREDICTED:_elongation_of_very_long_chain_fatty_acids_protein_7-like_[Amyelois_transitella]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0019367 P fatty acid elongation, saturated fatty acid
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0042761 P very long-chain fatty acid biosynthetic process
FPKM:1.96 TPM:1.82
5379 A_BomaMG_comp15169_c0_seq1
328bp
FPKM:1.84 TPM:1.71
5380 A_BomaMG_comp1516_c0_seq1
437bp
PREDICTED:_small_subunit_processome_component_20_homolog_[Bombyx_mori]
GO:0000447 P endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 P endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0008285 P negative regulation of cell population proliferation
GO:0030686 C 90S preribosome
GO:0030688 C preribosome, small subunit precursor
GO:0032040 C small-subunit processome
GO:0044822 F RNA binding
FPKM:0.80 TPM:0.74
5381 A_BomaMG_comp15170_c0_seq1
238bp
PREDICTED:_putative_nuclease_HARBI1_[Bombyx_mori]
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.73 TPM:2.53
5382 A_BomaMG_comp15170_c1_seq1
281bp
PREDICTED:_putative_nuclease_HARBI1_[Bombyx_mori]
FPKM:2.00 TPM:1.85
5383 A_BomaMG_comp151714_c0_seq1
475bp
FPKM:1.85 TPM:1.71
5384 A_BomaMG_comp15171_c0_seq1
349bp
hypothetical_protein_[Podospora_anserina_S_mat+]
FPKM:1.82 TPM:1.68
5385 A_BomaMG_comp15173_c0_seq1
255bp
PREDICTED:_peroxisomal_N(1)-acetyl-spermine/spermidine_oxidase_isoform_X1_[Bombyx_mori]
FPKM:3.50 TPM:3.24
5386 A_BomaMG_comp15174_c0_seq1
484bp
PREDICTED:_LOW_QUALITY_PROTEIN:_DNA_replication_licensing_factor_Mcm6-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0046872 F metal ion binding
GO:0051301 P cell division
FPKM:1.46 TPM:1.35
5387 A_BomaMG_comp15175_c0_seq1
222bp
PREDICTED:_protein_lin-54_homolog_[Bombyx_mori]
FPKM:2.30 TPM:2.13
5388 A_BomaMG_comp15176_c0_seq1
1117bp
FPKM:1.23 TPM:1.14
5389 A_BomaMG_comp15176_c1_seq1
543bp
hypothetical_protein_AMTR_s00040p00108040_[Amborella_trichopoda]
FPKM:1.41 TPM:1.30
5390 A_BomaMG_comp15178_c0_seq1
225bp
FPKM:0.66 TPM:0.62
5391 A_BomaMG_comp151791_c0_seq1
427bp
FPKM:2.35 TPM:2.17
5392 A_BomaMG_comp15179_c0_seq1
303bp
FPKM:1.12 TPM:1.04
5393 A_BomaMG_comp15180_c0_seq1
251bp
PREDICTED:_slit_homolog_3_protein-like_[Bombyx_mori]
FPKM:2.76 TPM:2.55
5394 A_BomaMG_comp15180_c1_seq1
289bp
PREDICTED:_slit_homolog_3_protein-like_[Bombyx_mori]
FPKM:2.48 TPM:2.30
5395 A_BomaMG_comp151827_c0_seq1
815bp
FPKM:1.92 TPM:1.78
5396 A_BomaMG_comp15182_c0_seq1
406bp
septin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005875 C microtubule associated complex
GO:0005940 C septin ring
GO:0007049 P cell cycle
GO:0007349 P cellularization
GO:0031105 C septin complex
GO:0031625 F ubiquitin protein ligase binding
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0045172 C germline ring canal
GO:0051301 P cell division
GO:0070938 C contractile ring
FPKM:2.11 TPM:1.96
5397 A_BomaMG_comp15182_c1_seq1
407bp
septin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005875 C microtubule associated complex
GO:0005940 C septin ring
GO:0007049 P cell cycle
GO:0007349 P cellularization
GO:0031105 C septin complex
GO:0031625 F ubiquitin protein ligase binding
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0045172 C germline ring canal
GO:0051301 P cell division
GO:0070938 C contractile ring
FPKM:1.35 TPM:1.25
5398 A_BomaMG_comp15184_c0_seq1
211bp
PREDICTED:_uncharacterized_protein_LOC101744645_[Bombyx_mori]
FPKM:4.27 TPM:3.96
5399 A_BomaMG_comp15185_c0_seq1
247bp
FPKM:0.00 TPM:0.00
5400 A_BomaMG_comp15185_c1_seq1
386bp
FPKM:1.33 TPM:1.23
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