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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

5011

A_BomaMG_comp1488_c0_seq1

592bp

PREDICTED:_glutamate_receptor_ionotropic,_kainate_2-like_[Bombyx_mori]

GO:0001662	P	behavioral fear response
GO:0004872	F	signaling receptor activity
GO:0004970	F	ionotropic glutamate receptor activity
GO:0005216	F	ion channel activity
GO:0005234	F	extracellularly glutamate-gated ion channel activity
GO:0005515	F	protein binding
GO:0005886	C	plasma membrane
GO:0005887	C	integral component of plasma membrane
GO:0006810	P	transport
GO:0006811	P	ion transport
GO:0006874	P	cellular calcium ion homeostasis
GO:0006886	P	intracellular protein transport
GO:0007165	P	signal transduction
GO:0007268	P	chemical synaptic transmission
GO:0008066	F	glutamate receptor activity
GO:0008328	C	ionotropic glutamate receptor complex
GO:0014069	C	postsynaptic density
GO:0015277	F	kainate selective glutamate receptor activity
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0019228	P	neuronal action potential
GO:0030054	C	cell junction
GO:0030165	F	PDZ domain binding
GO:0030424	C	axon
GO:0030425	C	dendrite
GO:0031624	F	ubiquitin conjugating enzyme binding
GO:0031625	F	ubiquitin protein ligase binding
GO:0032839	C	dendrite cytoplasm
GO:0032983	C	kainate selective glutamate receptor complex
GO:0034220	P	ion transmembrane transport
GO:0035235	P	ionotropic glutamate receptor signaling pathway
GO:0035249	P	synaptic transmission, glutamatergic
GO:0042391	P	regulation of membrane potential
GO:0042734	C	presynaptic membrane
GO:0042802	F	identical protein binding
GO:0042803	F	protein homodimerization activity
GO:0043025	C	neuronal cell body
GO:0043113	P	receptor clustering
GO:0043195	C	terminal bouton
GO:0043204	C	perikaryon
GO:0043524	P	negative regulation of neuron apoptotic process
GO:0043525	P	positive regulation of neuron apoptotic process
GO:0045202	C	synapse
GO:0045211	C	postsynaptic membrane
GO:0046328	P	regulation of JNK cascade
GO:0048169	P	regulation of long-term neuronal synaptic plasticity
GO:0048172	P	regulation of short-term neuronal synaptic plasticity
GO:0050804	P	modulation of chemical synaptic transmission
GO:0050806	P	positive regulation of synaptic transmission
GO:0051402	P	neuron apoptotic process
GO:0051967	P	negative regulation of synaptic transmission, glutamatergic
GO:0060079	P	excitatory postsynaptic potential
GO:0060080	P	inhibitory postsynaptic potential

FPKM:0.83 TPM:0.76

5012

A_BomaMG_comp1488_c1_seq1

281bp

PREDICTED:_glutamate_receptor_ionotropic,_kainate_2-like_[Bombyx_mori]

GO:0004872	F	signaling receptor activity
GO:0004970	F	ionotropic glutamate receptor activity
GO:0005216	F	ion channel activity
GO:0005886	C	plasma membrane
GO:0006810	P	transport
GO:0006811	P	ion transport
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0030054	C	cell junction
GO:0034220	P	ion transmembrane transport
GO:0035235	P	ionotropic glutamate receptor signaling pathway
GO:0045202	C	synapse
GO:0045211	C	postsynaptic membrane

FPKM:1.00 TPM:0.93

5013

A_BomaMG_comp14890_c0_seq1

310bp

PREDICTED:_zonadhesin-like_isoform_X2_[Bombyx_mori]

FPKM:1.83 TPM:1.70

5014

A_BomaMG_comp14890_c1_seq1

375bp

PREDICTED:_zonadhesin-like_isoform_X1_[Bombyx_mori]

GO:0004857	F	enzyme inhibitor activity
GO:0005615	C	extracellular space
GO:0008191	F	metalloendopeptidase inhibitor activity
GO:0009653	P	anatomical structure morphogenesis
GO:0010466	P	negative regulation of peptidase activity
GO:0010951	P	negative regulation of endopeptidase activity
GO:0030198	P	extracellular matrix organization
GO:0030414	F	peptidase inhibitor activity
GO:0042060	P	wound healing

FPKM:1.23 TPM:1.13

5015

A_BomaMG_comp148919_c0_seq1

2287bp

PREDICTED:_transport_and_Golgi_organization_protein_6-like_[Bombyx_mori]

GO:0016020	C	membrane
GO:0016021	C	integral component of membrane

FPKM:1.77 TPM:1.64

5016

A_BomaMG_comp14892_c0_seq1

222bp

FPKM:1.40 TPM:1.29

5017

A_BomaMG_comp14893_c0_seq1

251bp

forkfead_transcription_factor_G1_[Bombyx_mori]

GO:0000981	F	DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677	F	DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006357	P	regulation of transcription by RNA polymerase II
GO:0007275	P	multicellular organism development
GO:0043565	F	sequence-specific DNA binding

FPKM:2.30 TPM:2.13

5018

A_BomaMG_comp14894_c0_seq1

305bp

FPKM:1.90 TPM:1.76

5019

A_BomaMG_comp14895_c0_seq1

573bp

PREDICTED:_SAM_and_SH3_domain-containing_protein_1-like_[Bombyx_mori]

GO:0002639	P	positive regulation of immunoglobulin production
GO:0002726	P	positive regulation of T cell cytokine production
GO:0002821	P	positive regulation of adaptive immune response
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0030890	P	positive regulation of B cell proliferation
GO:0032729	P	positive regulation of interferon-gamma production
GO:0032733	P	positive regulation of interleukin-10 production
GO:0032743	P	positive regulation of interleukin-2 production
GO:0032753	P	positive regulation of interleukin-4 production
GO:0032760	P	positive regulation of tumor necrosis factor production
GO:0042102	P	positive regulation of T cell proliferation
GO:0043372	P	positive regulation of CD4-positive, alpha-beta T cell differentiation
GO:0046622	P	positive regulation of organ growth
GO:0048873	P	homeostasis of number of cells within a tissue
GO:0051251	P	positive regulation of lymphocyte activation

FPKM:1.13 TPM:1.04

5020

A_BomaMG_comp148966_c0_seq1

358bp

PREDICTED:_splicing_factor_3A_subunit_1_[Papilio_xuthus]

GO:0000381	P	regulation of alternative mRNA splicing, via spliceosome
GO:0000389	P	mRNA 3'-splice site recognition
GO:0000398	P	mRNA splicing, via spliceosome
GO:0003723	F	RNA binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005681	C	spliceosomal complex
GO:0005684	C	U2-type spliceosomal complex
GO:0005686	C	U2 snRNP
GO:0006396	P	RNA processing
GO:0006397	P	mRNA processing
GO:0008380	P	RNA splicing
GO:0044822	F	RNA binding
GO:0071004	C	U2-type prespliceosome
GO:0071013	C	catalytic step 2 spliceosome

FPKM:4.60 TPM:4.26

5021

A_BomaMG_comp14896_c0_seq1

227bp

FPKM:0.64 TPM:0.60

5022

A_BomaMG_comp14896_c1_seq1

265bp

PREDICTED:_WD_repeat-containing_protein_24-like_[Amyelois_transitella]

GO:0032008	P	positive regulation of TOR signaling
GO:0034198	P	cellular response to amino acid starvation
GO:0061700	C	GATOR2 complex

FPKM:1.96 TPM:1.81

5023

A_BomaMG_comp14897_c0_seq1

297bp

FPKM:1.16 TPM:1.07

5024

A_BomaMG_comp14898_c0_seq1

419bp

FPKM:1.43 TPM:1.32

5025

A_BomaMG_comp148993_c0_seq1

346bp

PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_CYLD_isoform_X3_[Bombyx_mori]

GO:0004843	F	thiol-dependent deubiquitinase
GO:0005515	F	protein binding
GO:0005737	C	cytoplasm
GO:0005813	C	centrosome
GO:0005815	C	microtubule organizing center
GO:0005819	C	spindle
GO:0005829	C	cytosol
GO:0005856	C	cytoskeleton
GO:0005874	C	microtubule
GO:0005881	C	cytoplasmic microtubule
GO:0005886	C	plasma membrane
GO:0006508	P	proteolysis
GO:0006511	P	ubiquitin-dependent protein catabolic process
GO:0007346	P	regulation of mitotic cell cycle
GO:0008233	F	peptidase activity
GO:0008234	F	cysteine-type peptidase activity
GO:0008270	F	zinc ion binding
GO:0016020	C	membrane
GO:0016055	P	Wnt signaling pathway
GO:0016579	P	protein deubiquitination
GO:0016787	F	hydrolase activity
GO:0019901	F	protein kinase binding
GO:0030496	C	midbody
GO:0031234	C	extrinsic component of cytoplasmic side of plasma membrane
GO:0032088	P	negative regulation of NF-kappaB transcription factor activity
GO:0036064	C	ciliary basal body
GO:0036459	F	thiol-dependent deubiquitinase
GO:0042347	P	negative regulation of NIK/NF-kappaB signaling
GO:0042995	C	cell projection
GO:0045581	P	negative regulation of T cell differentiation
GO:0046872	F	metal ion binding
GO:0048471	C	perinuclear region of cytoplasm
GO:0061578	F	Lys63-specific deubiquitinase activity
GO:0070064	F	proline-rich region binding
GO:0070266	P	necroptotic process
GO:0070507	P	regulation of microtubule cytoskeleton organization
GO:0070536	P	protein K63-linked deubiquitination
GO:0090090	P	negative regulation of canonical Wnt signaling pathway
GO:0097542	C	ciliary tip
GO:1901026	P	ripoptosome assembly involved in necroptotic process
GO:1902017	P	regulation of cilium assembly
GO:2001238	P	positive regulation of extrinsic apoptotic signaling pathway
GO:2001242	P	regulation of intrinsic apoptotic signaling pathway

FPKM:3.91 TPM:3.62

5026

A_BomaMG_comp149006_c0_seq1

1526bp

PREDICTED:_serine/threonine-protein_kinase_greatwall_isoform_X2_[Papilio_xuthus]

GO:0000086	P	G2/M transition of mitotic cell cycle
GO:0000166	F	nucleotide binding
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005813	C	centrosome
GO:0005815	C	microtubule organizing center
GO:0005856	C	cytoskeleton
GO:0006468	P	protein phosphorylation
GO:0006974	P	cellular response to DNA damage stimulus
GO:0007049	P	cell cycle
GO:0007067	P	mitotic cell cycle
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0018105	P	peptidyl-serine phosphorylation
GO:0032154	C	cleavage furrow
GO:0034048	P	negative regulation of phosphoprotein phosphatase activity
GO:0035556	P	intracellular signal transduction
GO:0051301	P	cell division
GO:0051721	F	protein phosphatase 2A binding

FPKM:1.81 TPM:1.68

5027

A_BomaMG_comp149011_c0_seq1

1205bp

PREDICTED:_MPN_domain-containing_protein_CG4751_isoform_X2_[Bombyx_mori]

GO:0003674	F	molecular_function
GO:0005575	C	cellular_component
GO:0006508	P	proteolysis
GO:0008150	P	biological_process
GO:0008233	F	peptidase activity
GO:0016787	F	hydrolase activity

FPKM:2.05 TPM:1.90

5028

A_BomaMG_comp149017_c0_seq1

636bp

Carboxypeptidase_[Operophtera_brumata]

GO:0004180	F	carboxypeptidase activity
GO:0004185	F	serine-type carboxypeptidase activity
GO:0005576	C	extracellular region
GO:0006508	P	proteolysis
GO:0008233	F	peptidase activity
GO:0016787	F	hydrolase activity