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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4441 A_BomaMG_comp14366_c0_seq1
310bp
PREDICTED:_pericentrin-like,_partial_[Bombyx_mori]
FPKM:2.62 TPM:2.42
4442 A_BomaMG_comp14367_c0_seq1
622bp
FPKM:1.54 TPM:1.42
4443 A_BomaMG_comp14368_c0_seq1
2257bp
PREDICTED:_uncharacterized_protein_LOC101740358_isoform_X2_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0016023 C cytoplasmic vesicle
GO:0031410 C cytoplasmic vesicle
GO:0032579 C apical lamina of hyaline layer
GO:0033166 C hyaline layer
FPKM:1.27 TPM:1.18
4444 A_BomaMG_comp14369_c0_seq1
2173bp
PREDICTED:_THO_complex_subunit_5_homolog_[Amyelois_transitella]
GO:0000346 C transcription export complex
GO:0000347 C THO complex
GO:0000445 C THO complex part of transcription export complex
GO:0000784 C chromosome, telomeric region
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006369 P termination of RNA polymerase II transcription
GO:0006397 P mRNA processing
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0030154 P cell differentiation
GO:0030224 P monocyte differentiation
GO:0031124 P mRNA 3'-end processing
GO:0032786 P positive regulation of DNA-templated transcription, elongation
GO:0046784 P viral mRNA export from host cell nucleus
GO:0051028 P mRNA transport
GO:0060215 P primitive hemopoiesis
GO:2000002 P negative regulation of DNA damage checkpoint
FPKM:4.26 TPM:3.95
4445 A_BomaMG_comp1436_c0_seq1
297bp
PREDICTED:_protein_king_tubby_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005929 C cilium
GO:0006897 P endocytosis
GO:0007608 P sensory perception of smell
GO:0009744 P response to sucrose
GO:0016028 C rhabdomere
GO:0016059 P deactivation of rhodopsin mediated signaling
GO:0035091 F phosphatidylinositol binding
GO:0042593 P glucose homeostasis
GO:0061512 P protein localization to cilium
GO:0070328 P triglyceride homeostasis
FPKM:1.45 TPM:1.34
4446 A_BomaMG_comp1436_c1_seq1
229bp
PREDICTED:_protein_king_tubby_isoform_X1_[Papilio_machaon]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005929 C cilium
GO:0035091 F phosphatidylinositol binding
GO:0061512 P protein localization to cilium
FPKM:0.62 TPM:0.58
4447 A_BomaMG_comp14370_c0_seq1
717bp
FPKM:1.45 TPM:1.35
4448 A_BomaMG_comp14371_c0_seq1
584bp
PREDICTED:_plasminogen_receptor_(KT)_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006935 P chemotaxis
GO:0006954 P inflammatory response
GO:0010756 P positive regulation of plasminogen activation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:1.60 TPM:1.48
4449 A_BomaMG_comp14371_c1_seq1
289bp
FPKM:0.00 TPM:0.00
4450 A_BomaMG_comp14372_c0_seq1
310bp
PREDICTED:_uncharacterized_protein_LOC106141610_[Amyelois_transitella]
FPKM:2.09 TPM:1.94
4451 A_BomaMG_comp14373_c0_seq1
208bp
PREDICTED:_uncharacterized_protein_LOC101742145_[Bombyx_mori]
FPKM:1.82 TPM:1.68
4452 A_BomaMG_comp14374_c0_seq1
313bp
hypothetical_protein_[Erysipelotrichaceae_bacterium_NK3D112]
FPKM:2.30 TPM:2.13
4453 A_BomaMG_comp14375_c0_seq1
255bp
PREDICTED:_axin_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007447 P imaginal disc pattern formation
GO:0007455 P eye-antennal disc morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007507 P heart development
GO:0008013 F beta-catenin binding
GO:0010941 P regulation of cell death
GO:0016055 P Wnt signaling pathway
GO:0019901 F protein kinase binding
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0035019 P somatic stem cell population maintenance
GO:0042594 P response to starvation
GO:0043547 P positive regulation of GTPase activity
GO:0048477 P oogenesis
FPKM:1.75 TPM:1.62
4454 A_BomaMG_comp14376_c0_seq1
222bp
hypothetical_protein_[Butyrivibrio_sp._AE2032]
FPKM:0.70 TPM:0.65
4455 A_BomaMG_comp14378_c0_seq1
675bp
PREDICTED:_cysteine_and_histidine-rich_protein_1_homolog_isoform_X4_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:6.31 TPM:5.85
4456 A_BomaMG_comp14379_c0_seq1
420bp
FPKM:1.42 TPM:1.32
4457 A_BomaMG_comp14379_c1_seq1
288bp
FPKM:0.94 TPM:0.87
4458 A_BomaMG_comp1437_c0_seq1
352bp
MSL1_protein_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0016568 P chromatin organization
GO:0043984 P histone H4-K16 acetylation
GO:0072487 C MSL complex
FPKM:1.19 TPM:1.10
4459 A_BomaMG_comp14382_c0_seq1
503bp
PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
FPKM:2.11 TPM:1.95
4460 A_BomaMG_comp14383_c0_seq1
311bp
FPKM:2.86 TPM:2.64
4461 A_BomaMG_comp143841_c0_seq1
348bp
FPKM:1.22 TPM:1.13
4462 A_BomaMG_comp14384_c0_seq1
1725bp
ubiquitin-conjugating_enzyme_E2L_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008283 P cell population proliferation
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031398 P positive regulation of protein ubiquitination
GO:0031625 F ubiquitin protein ligase binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044770 P cell cycle phase transition
GO:0044822 F RNA binding
GO:0051443 P positive regulation of ubiquitin-protein transferase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070062 C extracellular exosome
GO:0070979 P protein K11-linked ubiquitination
GO:0071383 P cellular response to steroid hormone stimulus
GO:0071385 P cellular response to glucocorticoid stimulus
GO:0097027 F ubiquitin-protein transferase activator activity
GO:1903955 P positive regulation of protein targeting to mitochondrion
FPKM:31.65 TPM:29.31
4463 A_BomaMG_comp143852_c0_seq1
492bp
PREDICTED:_uncharacterized_protein_LOC101743023_[Bombyx_mori]
FPKM:2.40 TPM:2.22
4464 A_BomaMG_comp14385_c0_seq1
395bp
PREDICTED:_spindle_assembly_abnormal_protein_6_homolog_isoform_X2_[Bombyx_mori]
FPKM:1.27 TPM:1.18
4465 A_BomaMG_comp14386_c0_seq1
267bp
FPKM:0.77 TPM:0.71
4466 A_BomaMG_comp14387_c0_seq1
940bp
PREDICTED:_sorting_nexin-27_[Amyelois_transitella]
GO:0001772 C immunological synapse
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008289 F lipid binding
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0030904 C retromer complex
GO:0031901 C early endosome membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0035091 F phosphatidylinositol binding
GO:0042493 P response to xenobiotic stimulus
GO:0071203 C WASH complex
GO:1990126 P endocytic recycling
FPKM:2.59 TPM:2.40
4467 A_BomaMG_comp14387_c1_seq1
247bp
Sorting_nexin-27_[Papilio_machaon]
FPKM:2.42 TPM:2.24
4468 A_BomaMG_comp14389_c0_seq1
466bp
FPKM:1.19 TPM:1.10
4469 A_BomaMG_comp1438_c0_seq1
394bp
UDP-glycosyltransferase_UGT39B1_precursor_[Bombyx_mori]
FPKM:0.48 TPM:0.44
4470 A_BomaMG_comp14390_c0_seq1
3232bp
PREDICTED:_nuclear_receptor_coactivator_6-like_[Bombyx_mori]
FPKM:4.19 TPM:3.88
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