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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3931 A_BomaMG_comp13983_c0_seq1
626bp
FPKM:1.60 TPM:1.48
3932 A_BomaMG_comp13984_c0_seq1
482bp
FPKM:1.69 TPM:1.57
3933 A_BomaMG_comp13985_c0_seq1
253bp
putative_uncharacterized_protein_[Prevotella_sp._CAG:1320]
FPKM:1.35 TPM:1.25
3934 A_BomaMG_comp139868_c0_seq1
305bp
PREDICTED:_protein_MON2_homolog_[Bombyx_mori]
FPKM:4.35 TPM:4.03
3935 A_BomaMG_comp139869_c0_seq1
325bp
PREDICTED:_nuclear_pore_complex_protein_Nup98-Nup96_isoform_X1_[Bombyx_mori]
FPKM:4.00 TPM:3.70
3936 A_BomaMG_comp13986_c0_seq1
864bp
PREDICTED:_uncharacterized_protein_LOC106136529_[Amyelois_transitella]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007416 P synapse assembly
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0007616 P long-term memory
GO:0008345 P larval locomotory behavior
GO:0008355 P olfactory learning
GO:0040011 P locomotion
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0050773 P regulation of dendrite development
FPKM:1.88 TPM:1.75
3937 A_BomaMG_comp13986_c1_seq1
489bp
PREDICTED:_coronin-7_isoform_X2_[Neodiprion_lecontei]
FPKM:1.21 TPM:1.12
3938 A_BomaMG_comp13987_c0_seq1
699bp
PREDICTED:_uncharacterized_protein_LOC106133708_[Amyelois_transitella]
FPKM:1.70 TPM:1.58
3939 A_BomaMG_comp13988_c0_seq1
736bp
PREDICTED:_uncharacterized_protein_LOC106713191_[Papilio_machaon]
FPKM:1.40 TPM:1.30
3940 A_BomaMG_comp13989_c0_seq1
263bp
nitrate_reductase_[Peptoclostridium_difficile]
FPKM:2.80 TPM:2.59
3941 A_BomaMG_comp139903_c0_seq1
775bp
FPKM:2.40 TPM:2.22
3942 A_BomaMG_comp13991_c0_seq1
393bp
FPKM:1.76 TPM:1.63
3943 A_BomaMG_comp13991_c1_seq1
452bp
FPKM:0.75 TPM:0.70
3944 A_BomaMG_comp13992_c0_seq1
572bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.21 TPM:1.12
3945 A_BomaMG_comp13993_c0_seq1
347bp
FPKM:3.27 TPM:3.03
3946 A_BomaMG_comp139946_c0_seq1
361bp
PREDICTED:_DNA_repair_protein_XRCC1_isoform_X2_[Bombyx_mori]
FPKM:3.21 TPM:2.97
3947 A_BomaMG_comp13994_c0_seq1
463bp
PREDICTED:_ribosome-releasing_factor_2,_mitochondrial_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0032543 P mitochondrial translation
GO:0032790 P ribosome disassembly
FPKM:1.69 TPM:1.56
3948 A_BomaMG_comp139952_c0_seq1
246bp
hypothetical_protein_KGM_13330_[Danaus_plexippus]
FPKM:7.83 TPM:7.25
3949 A_BomaMG_comp139955_c0_seq1
440bp
FPKM:1.44 TPM:1.34
3950 A_BomaMG_comp13995_c0_seq1
973bp
PREDICTED:_sorting_nexin-2_[Bombyx_mori]
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030027 C lamellipodium
GO:0030904 C retromer complex
GO:0031901 C early endosome membrane
GO:0035091 F phosphatidylinositol binding
GO:0042147 P retrograde transport, endosome to Golgi
GO:0042995 C cell projection
GO:0072673 P lamellipodium morphogenesis
FPKM:11.72 TPM:10.85
3951 A_BomaMG_comp13997_c0_seq1
1432bp
PREDICTED:_protein_HID1_[Bombyx_mori]
GO:0000138 C Golgi trans cisterna
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0005881 C cytoplasmic microtubule
GO:0006886 P intracellular protein transport
GO:0016020 C membrane
GO:0031001 P response to brefeldin A
GO:0070062 C extracellular exosome
GO:0090498 C extrinsic component of Golgi membrane
FPKM:2.73 TPM:2.53
3952 A_BomaMG_comp13997_c1_seq1
328bp
PREDICTED:_protein_HID1-like_[Papilio_machaon]
GO:0000138 C Golgi trans cisterna
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0005881 C cytoplasmic microtubule
GO:0006886 P intracellular protein transport
GO:0016020 C membrane
GO:0031001 P response to brefeldin A
GO:0070062 C extracellular exosome
GO:0090498 C extrinsic component of Golgi membrane
FPKM:2.53 TPM:2.35
3953 A_BomaMG_comp139988_c0_seq1
300bp
PREDICTED:_tensin-2_isoform_X1_[Bombyx_mori]
FPKM:3.68 TPM:3.40
3954 A_BomaMG_comp139995_c0_seq1
531bp
Coiled-coil_domain-containing_protein_86_[Operophtera_brumata]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0016032 P viral process
GO:0044822 F RNA binding
FPKM:3.20 TPM:2.96
3955 A_BomaMG_comp1399_c0_seq1
279bp
putative_transporter_[Operophtera_brumata]
FPKM:1.02 TPM:0.94
3956 A_BomaMG_comp1399_c1_seq1
248bp
Major_facilitator_superfamily_domain-containing_protein_6_[Papilio_machaon]
FPKM:1.43 TPM:1.33
3957 A_BomaMG_comp14000_c0_seq1
480bp
PREDICTED:_glypican-4_[Bombyx_mori]
FPKM:2.04 TPM:1.89
3958 A_BomaMG_comp14000_c1_seq1
368bp
PREDICTED:_glypican-4_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0031225 C anchored component of membrane
GO:0043395 F heparan sulfate proteoglycan binding
FPKM:3.81 TPM:3.53
3959 A_BomaMG_comp14002_c0_seq1
675bp
PREDICTED:_zinc_finger_protein_718-like_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
FPKM:1.58 TPM:1.46
3960 A_BomaMG_comp14002_c1_seq1
248bp
PREDICTED:_zinc_finger_protein_718-like_isoform_X2_[Bombyx_mori]
FPKM:0.00 TPM:0.00
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