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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3871 A_BomaMG_comp139461_c0_seq1
375bp
FPKM:2.63 TPM:2.43
3872 A_BomaMG_comp139469_c0_seq1
337bp
FPKM:3.69 TPM:3.42
3873 A_BomaMG_comp13946_c0_seq1
233bp
hypothetical_protein_VM1G_04115_[Valsa_mali]
FPKM:1.17 TPM:1.09
3874 A_BomaMG_comp13946_c1_seq1
527bp
FPKM:1.08 TPM:1.00
3875 A_BomaMG_comp139470_c0_seq1
279bp
UMP_kinase_[Saccharopolyspora_spinosa]
FPKM:4.42 TPM:4.09
3876 A_BomaMG_comp139471_c0_seq1
594bp
FPKM:2.46 TPM:2.28
3877 A_BomaMG_comp139489_c0_seq1
914bp
PREDICTED:_RNA-binding_protein_48_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005654 C nucleoplasm
GO:0008150 P biological_process
FPKM:2.45 TPM:2.27
3878 A_BomaMG_comp13948_c0_seq1
1014bp
FPKM:8.33 TPM:7.72
3879 A_BomaMG_comp1394_c0_seq1
287bp
FPKM:1.26 TPM:1.17
3880 A_BomaMG_comp139502_c0_seq1
469bp
reverse_transcriptase_[Bombyx_mori]
FPKM:2.48 TPM:2.29
3881 A_BomaMG_comp139513_c0_seq1
860bp
PREDICTED:_uncharacterized_protein_LOC106713539_[Papilio_machaon]
FPKM:2.20 TPM:2.03
3882 A_BomaMG_comp13952_c0_seq1
566bp
putative_pol-like_protein_[Danaus_plexippus]
FPKM:1.06 TPM:0.98
3883 A_BomaMG_comp139538_c0_seq1
877bp
PREDICTED:_copper_homeostasis_protein_cutC_homolog_isoform_X1_[Bombyx_mori]
GO:0005507 F copper ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0018991 P oviposition
GO:0030054 C cell junction
GO:0032504 P multicellular organism reproduction
GO:0034220 P ion transmembrane transport
GO:0035264 P multicellular organism growth
GO:0040025 P vulval development
GO:0046688 P response to copper ion
GO:0055070 P copper ion homeostasis
GO:0055120 C striated muscle dense body
FPKM:2.09 TPM:1.94
3884 A_BomaMG_comp13953_c0_seq1
487bp
PREDICTED:_potassium_voltage-gated_channel_subfamily_H_member_6-like_isoform_X3_[Bombyx_mori]
FPKM:1.44 TPM:1.34
3885 A_BomaMG_comp13954_c0_seq1
518bp
hypothetical_protein_RR48_15408_[Papilio_machaon]
FPKM:1.71 TPM:1.59
3886 A_BomaMG_comp13956_c0_seq1
457bp
Uncharacterized_protein_OBRU01_09865_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016020 C membrane
FPKM:1.72 TPM:1.60
3887 A_BomaMG_comp13957_c0_seq1
709bp
PREDICTED:_LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005518 F collagen binding
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019215 F intermediate filament binding
GO:0030056 C hemidesmosome
FPKM:1.41 TPM:1.31
3888 A_BomaMG_comp13957_c1_seq1
313bp
PREDICTED:_LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
GO:0001764 P neuron migration
GO:0001932 P regulation of protein phosphorylation
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007413 P axonal fasciculation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032880 P regulation of protein localization
GO:0036514 P dopaminergic neuron axon guidance
GO:0036515 P serotonergic neuron axon guidance
GO:0042384 P cilium assembly
GO:1904938 P planar cell polarity pathway involved in axon guidance
FPKM:1.53 TPM:1.42
3889 A_BomaMG_comp139582_c0_seq1
275bp
FPKM:0.35 TPM:0.33
3890 A_BomaMG_comp139585_c0_seq1
627bp
FPKM:2.05 TPM:1.90
3891 A_BomaMG_comp13958_c0_seq1
292bp
FPKM:2.42 TPM:2.24
3892 A_BomaMG_comp13959_c0_seq1
573bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.47 TPM:1.36
3893 A_BomaMG_comp1395_c0_seq1
231bp
PREDICTED:_dedicator_of_cytokinesis_protein_9_[Bombyx_mori]
FPKM:1.81 TPM:1.68
3894 A_BomaMG_comp139606_c0_seq1
394bp
PREDICTED:_PAX3-_and_PAX7-binding_protein_1_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0014842 P regulation of skeletal muscle satellite cell proliferation
GO:0031062 P positive regulation of histone methylation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:2000288 P positive regulation of myoblast proliferation
FPKM:2.71 TPM:2.51
3895 A_BomaMG_comp13960_c0_seq1
287bp
PREDICTED:_neuroendocrine_convertase_2_[Bombyx_mori]
GO:0004175 F endopeptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0007399 P nervous system development
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016485 P protein processing
GO:0016486 P peptide hormone processing
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0030070 P insulin processing
GO:0030133 C transport vesicle
GO:0030141 C secretory granule
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0032403 F protein-containing complex binding
GO:0034230 P enkephalin processing
GO:0034231 P islet amyloid polypeptide processing
GO:0043025 C neuronal cell body
GO:0043204 C perikaryon
FPKM:1.89 TPM:1.75
3896 A_BomaMG_comp13960_c1_seq1
255bp
putative_neuroendocrine_convertase_2_precursor,_partial_[Xibalbanus_tulumensis]
GO:0004175 F endopeptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0007399 P nervous system development
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016485 P protein processing
GO:0016486 P peptide hormone processing
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0030070 P insulin processing
GO:0030133 C transport vesicle
GO:0030141 C secretory granule
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0032403 F protein-containing complex binding
GO:0034230 P enkephalin processing
GO:0034231 P islet amyloid polypeptide processing
GO:0043025 C neuronal cell body
GO:0043204 C perikaryon
FPKM:0.88 TPM:0.81
3897 A_BomaMG_comp13961_c0_seq1
281bp
hypothetical_protein_B30_05397_[Celeribacter_baekdonensis_B30]
FPKM:2.33 TPM:2.16
3898 A_BomaMG_comp139627_c0_seq1
553bp
FPKM:2.46 TPM:2.28
3899 A_BomaMG_comp13963_c0_seq1
212bp
PREDICTED:_ras_guanyl-releasing_protein_3_[Erinaceus_europaeus]
FPKM:0.84 TPM:0.78
3900 A_BomaMG_comp139644_c0_seq1
404bp
hypothetical_protein_[Streptomyces_catenulae]
FPKM:2.29 TPM:2.12
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