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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3811 A_BomaMG_comp1389_c0_seq1
287bp
PREDICTED:_DENN_domain-containing_protein_1B-like_isoform_X3_[Bombyx_mori]
FPKM:1.58 TPM:1.46
3812 A_BomaMG_comp13902_c0_seq1
257bp
FPKM:1.71 TPM:1.58
3813 A_BomaMG_comp13903_c0_seq1
269bp
GL25959_[Drosophila_persimilis]
FPKM:1.88 TPM:1.74
3814 A_BomaMG_comp13904_c0_seq1
295bp
FPKM:1.77 TPM:1.64
3815 A_BomaMG_comp13905_c0_seq1
382bp
PREDICTED:_zinc_finger_protein_16-like_[Bombyx_mori]
FPKM:1.69 TPM:1.56
3816 A_BomaMG_comp13906_c0_seq1
232bp
FPKM:3.57 TPM:3.31
3817 A_BomaMG_comp13907_c0_seq1
391bp
FPKM:1.62 TPM:1.50
3818 A_BomaMG_comp13907_c1_seq1
698bp
FPKM:2.62 TPM:2.43
3819 A_BomaMG_comp13908_c0_seq1
712bp
PREDICTED:_uncharacterized_protein_LOC101741159_isoform_X2_[Bombyx_mori]
FPKM:1.40 TPM:1.30
3820 A_BomaMG_comp13909_c0_seq1
303bp
FPKM:2.21 TPM:2.05
3821 A_BomaMG_comp1390_c0_seq1
214bp
PREDICTED:_uncharacterized_protein_LOC103308456_[Acyrthosiphon_pisum]
FPKM:1.61 TPM:1.49
3822 A_BomaMG_comp13910_c0_seq1
1348bp
PREDICTED:_protein_4.1_homolog_[Bombyx_mori]
GO:0003015 P heart process
GO:0003674 F molecular_function
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0005920 C smooth septate junction
GO:0006612 P protein targeting to membrane
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007435 P salivary gland morphogenesis
GO:0007527 P adult somatic muscle development
GO:0008092 F cytoskeletal protein binding
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0009790 P embryo development
GO:0019991 P septate junction assembly
GO:0030054 C cell junction
GO:0035151 P regulation of tube size, open tracheal system
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045216 P cell-cell junction organization
GO:0060857 P establishment of glial blood-brain barrier
GO:0061343 P cell adhesion involved in heart morphogenesis
FPKM:4.29 TPM:3.98
3823 A_BomaMG_comp139116_c0_seq1
224bp
hypothetical_protein_[Enterobacter_cloacae]
FPKM:2.03 TPM:1.88
3824 A_BomaMG_comp13911_c0_seq1
352bp
FPKM:1.98 TPM:1.84
3825 A_BomaMG_comp13913_c0_seq1
329bp
PREDICTED:_uncharacterized_protein_LOC101740358_isoform_X2_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0007155 P cell adhesion
GO:0008150 P biological_process
GO:0016020 C membrane
FPKM:1.37 TPM:1.27
3826 A_BomaMG_comp13913_c1_seq1
411bp
PREDICTED:_uncharacterized_protein_LOC101740358_isoform_X2_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0007155 P cell adhesion
GO:0016020 C membrane
FPKM:1.92 TPM:1.78
3827 A_BomaMG_comp13915_c0_seq1
963bp
PREDICTED:_WD_repeat_and_FYVE_domain-containing_protein_3_[Bombyx_mori]
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005515 F protein binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
FPKM:1.17 TPM:1.08
3828 A_BomaMG_comp13916_c0_seq1
396bp
PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_12_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045498 P sex comb development
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
FPKM:4.11 TPM:3.80
3829 A_BomaMG_comp13916_c1_seq1
330bp
hypothetical_protein_KGM_13756_[Danaus_plexippus]
GO:0001104 F transcription coregulator activity
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045498 P sex comb development
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
FPKM:1.82 TPM:1.68
3830 A_BomaMG_comp13917_c0_seq1
400bp
FPKM:1.55 TPM:1.44
3831 A_BomaMG_comp13918_c0_seq1
452bp
PREDICTED:_regulating_synaptic_membrane_exocytosis_protein_2_isoform_X5_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0010628 P positive regulation of gene expression
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0017156 P calcium-ion regulated exocytosis
GO:0017157 P regulation of exocytosis
GO:0019933 P cAMP-mediated signaling
GO:0030054 C cell junction
GO:0030073 P insulin secretion
GO:0030154 P cell differentiation
GO:0042391 P regulation of membrane potential
GO:0042734 C presynaptic membrane
GO:0044325 F transmembrane transporter binding
GO:0045202 C synapse
GO:0046872 F metal ion binding
GO:0048786 C presynaptic active zone
GO:0048791 P calcium ion-regulated exocytosis of neurotransmitter
GO:0061669 P spontaneous neurotransmitter secretion
GO:0070062 C extracellular exosome
GO:0097151 P positive regulation of inhibitory postsynaptic potential
GO:1903861 P positive regulation of dendrite extension
GO:2000463 P positive regulation of excitatory postsynaptic potential
FPKM:1.63 TPM:1.51
3832 A_BomaMG_comp13919_c0_seq1
1129bp
CRAL-TRIO_domain-containing_protein,_partial_[Manduca_sexta]
GO:0001890 P placenta development
GO:0001892 P embryonic placenta development
GO:0005215 F transporter activity
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007584 P response to nutrient
GO:0008289 F lipid binding
GO:0008431 F vitamin E binding
GO:0009268 P response to pH
GO:0009636 P response to toxic substance
GO:0019842 F vitamin binding
GO:0032502 P developmental process
GO:0042360 P vitamin E metabolic process
GO:0043325 F phosphatidylinositol-3,4-bisphosphate binding
GO:0046909 P obsolete intermembrane transport
GO:0051180 P vitamin transport
GO:0051452 P intracellular pH reduction
GO:0060548 P negative regulation of cell death
GO:0090212 P negative regulation of establishment of blood-brain barrier
FPKM:38.11 TPM:35.29
3833 A_BomaMG_comp13921_c0_seq1
445bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
FPKM:1.29 TPM:1.19
3834 A_BomaMG_comp13921_c1_seq1
394bp
PREDICTED:_intracellular_protein_transport_protein_USO1-like_[Bombyx_mori]
FPKM:1.12 TPM:1.03
3835 A_BomaMG_comp13922_c0_seq1
967bp
hypothetical_protein_KGM_11768_[Danaus_plexippus]
GO:0000151 C ubiquitin ligase complex
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032182 F ubiquitin-like protein binding
GO:0045116 P protein neddylation
GO:0051443 P positive regulation of ubiquitin-protein transferase activity
GO:0097602 F cullin family protein binding
FPKM:1.55 TPM:1.44
3836 A_BomaMG_comp13923_c0_seq1
369bp
FPKM:2.35 TPM:2.17
3837 A_BomaMG_comp13925_c0_seq1
901bp
PREDICTED:_uncharacterized_protein_LOC101743538_[Bombyx_mori]
FPKM:1.55 TPM:1.44
3838 A_BomaMG_comp13925_c1_seq1
359bp
PREDICTED:_uncharacterized_protein_LOC101743538_[Bombyx_mori]
FPKM:2.10 TPM:1.94
3839 A_BomaMG_comp13926_c0_seq1
526bp
S1_RNA-binding_domain-containing_protein_1,_partial_[Mesitornis_unicolor]
FPKM:1.48 TPM:1.37
3840 A_BomaMG_comp13927_c0_seq1
202bp
FPKM:1.03 TPM:0.96
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