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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3451 A_BomaMG_comp13549_c1_seq1
941bp
FPKM:1.69 TPM:1.57
3452 A_BomaMG_comp1354_c0_seq1
261bp
FPKM:2.86 TPM:2.65
3453 A_BomaMG_comp1354_c1_seq1
495bp
FPKM:1.19 TPM:1.10
3454 A_BomaMG_comp13550_c0_seq1
317bp
Transposon_Tn10_TetD_protein_[Anoxybacillus_sp._P3H1B]
FPKM:1.49 TPM:1.38
3455 A_BomaMG_comp13550_c1_seq1
241bp
type_11_methyltransferase_[Chloroherpeton_thalassium]
FPKM:2.09 TPM:1.94
3456 A_BomaMG_comp13551_c0_seq1
238bp
FPKM:6.00 TPM:5.56
3457 A_BomaMG_comp135524_c0_seq1
442bp
FPKM:2.47 TPM:2.29
3458 A_BomaMG_comp13553_c0_seq1
578bp
insulin_receptor_precursor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005009 F insulin-activated receptor activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0008286 P insulin receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0042169 F SH2 domain binding
GO:0043548 F phosphatidylinositol 3-kinase binding
GO:0043559 F insulin binding
GO:0043560 F insulin receptor substrate binding
GO:0046777 P protein autophosphorylation
GO:0051290 P protein heterotetramerization
GO:0051425 F PTB domain binding
FPKM:1.62 TPM:1.50
3459 A_BomaMG_comp13554_c0_seq1
591bp
FPKM:1.41 TPM:1.30
3460 A_BomaMG_comp13554_c1_seq1
382bp
FPKM:0.85 TPM:0.78
3461 A_BomaMG_comp13555_c0_seq1
366bp
PREDICTED:_uncharacterized_protein_LOC101743882_[Bombyx_mori]
FPKM:0.77 TPM:0.71
3462 A_BomaMG_comp13555_c0_seq2
358bp
PREDICTED:_uncharacterized_protein_LOC101743882_[Bombyx_mori]
FPKM:1.69 TPM:1.56
3463 A_BomaMG_comp13556_c0_seq1
471bp
FPKM:2.46 TPM:2.28
3464 A_BomaMG_comp13556_c1_seq1
370bp
FPKM:1.98 TPM:1.83
3465 A_BomaMG_comp135571_c0_seq1
285bp
ABC_transporter_[Leptospirillum_ferriphilum]
FPKM:0.64 TPM:0.60
3466 A_BomaMG_comp13557_c0_seq1
277bp
PREDICTED:_myotubularin-related_protein_5-like_[Papilio_xuthus]
GO:0001558 P regulation of cell growth
GO:0001691 F pseudophosphatase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0007283 P spermatogenesis
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0019208 F phosphatase regulator activity
GO:0043086 P negative regulation of catalytic activity
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
FPKM:3.12 TPM:2.89
3467 A_BomaMG_comp13557_c1_seq1
427bp
PREDICTED:_myotubularin-related_protein_5_[Bombyx_mori]
GO:0001558 P regulation of cell growth
GO:0001691 F pseudophosphatase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0007283 P spermatogenesis
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0019208 F phosphatase regulator activity
GO:0043086 P negative regulation of catalytic activity
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
FPKM:1.80 TPM:1.66
3468 A_BomaMG_comp13558_c0_seq1
281bp
FPKM:3.00 TPM:2.78
3469 A_BomaMG_comp13558_c1_seq1
250bp
FPKM:1.40 TPM:1.29
3470 A_BomaMG_comp135591_c0_seq1
531bp
PREDICTED:_protein_UXT_homolog_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001104 F transcription coregulator activity
GO:0001106 F transcription corepressor activity
GO:0005634 C nucleus
GO:0006457 P protein folding
GO:0016272 C prefoldin complex
GO:0051082 F unfolded protein binding
FPKM:1.94 TPM:1.80
3471 A_BomaMG_comp1355_c0_seq1
275bp
putative_Xsmad4a_[Danaus_plexippus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000790 C chromatin
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000987 F cis-regulatory region sequence-specific DNA binding
GO:0000988 F obsolete transcription factor activity, protein binding
GO:0001076 F obsolete transcription factor activity, RNA polymerase II transcription factor binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001541 P ovarian follicle development
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0001666 P response to hypoxia
GO:0001701 P in utero embryonic development
GO:0001702 P gastrulation with mouth forming second
GO:0001822 P kidney development
GO:0003190 P atrioventricular valve formation
GO:0003198 P epithelial to mesenchymal transition involved in endocardial cushion formation
GO:0003251 P positive regulation of cell proliferation involved in heart valve morphogenesis
GO:0003279 P cardiac septum development
GO:0003360 P brainstem development
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006879 P cellular iron ion homeostasis
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007183 P SMAD protein complex assembly
GO:0007283 P spermatogenesis
GO:0007338 P single fertilization
GO:0007369 P gastrulation
GO:0007411 P axon guidance
GO:0007492 P endoderm development
GO:0007498 P mesoderm development
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0008584 P male gonad development
GO:0008585 P female gonad development
GO:0009952 P anterior/posterior pattern specification
GO:0010718 P positive regulation of epithelial to mesenchymal transition
GO:0010862 P positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0014033 P neural crest cell differentiation
GO:0017015 P regulation of transforming growth factor beta receptor signaling pathway
GO:0030308 P negative regulation of cell growth
GO:0030509 P BMP signaling pathway
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0030513 P positive regulation of BMP signaling pathway
GO:0030616 F obsolete transforming growth factor beta receptor, common-partner cytoplasmic mediator activity
GO:0032444 C activin responsive factor complex
GO:0032525 P somite rostral/caudal axis specification
GO:0032909 P regulation of transforming growth factor beta2 production
GO:0033686 P positive regulation of luteinizing hormone secretion
GO:0035556 P intracellular signal transduction
GO:0036302 P atrioventricular canal development
GO:0042118 P endothelial cell activation
GO:0042127 P regulation of cell population proliferation
GO:0042177 P negative regulation of protein catabolic process
GO:0042733 P embryonic digit morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046881 P positive regulation of follicle-stimulating hormone secretion
GO:0046982 F protein heterodimerization activity
GO:0048589 P developmental growth
GO:0048663 P neuron fate commitment
GO:0048729 P tissue morphogenesis
GO:0048733 P sebaceous gland development
GO:0048859 P formation of anatomical boundary
GO:0051098 P regulation of binding
GO:0051571 P positive regulation of histone H3-K4 methylation
GO:0051797 P regulation of hair follicle development
GO:0060021 P roof of mouth development
GO:0060065 P uterus development
GO:0060391 P positive regulation of SMAD protein signal transduction
GO:0060395 P SMAD protein signal transduction
GO:0060548 P negative regulation of cell death
GO:0060956 P endocardial cell differentiation
GO:0061040 P female gonad morphogenesis
GO:0070102 P interleukin-6-mediated signaling pathway
GO:0070411 F I-SMAD binding
GO:0070412 F R-SMAD binding
GO:0071141 C SMAD protein complex
GO:0071559 P response to transforming growth factor beta
GO:0072133 P metanephric mesenchyme morphogenesis
GO:0072134 P nephrogenic mesenchyme morphogenesis
GO:0072520 P seminiferous tubule development
GO:0090575 C RNA polymerase II transcription regulator complex
GO:2000617 P positive regulation of histone H3-K9 acetylation
FPKM:1.41 TPM:1.31
3472 A_BomaMG_comp13560_c0_seq1
426bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.55 TPM:0.51
3473 A_BomaMG_comp13561_c0_seq1
808bp
PREDICTED:_zinc_finger_protein_564-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004803 F transposase activity
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
FPKM:2.05 TPM:1.90
3474 A_BomaMG_comp13561_c1_seq1
913bp
PREDICTED:_zinc_finger_protein_564-like_[Bombyx_mori]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.34 TPM:1.24
3475 A_BomaMG_comp135622_c0_seq1
446bp
olfactory_receptor_[Bombyx_mori]
FPKM:2.56 TPM:2.37
3476 A_BomaMG_comp13562_c0_seq1
231bp
FPKM:1.21 TPM:1.12
3477 A_BomaMG_comp135638_c0_seq1
266bp
FPKM:2.71 TPM:2.51
3478 A_BomaMG_comp13563_c0_seq1
417bp
PREDICTED:_uncharacterized_protein_LOC101737582,_partial_[Bombyx_mori]
FPKM:1.58 TPM:1.47
3479 A_BomaMG_comp13563_c0_seq2
336bp
PREDICTED:_uncharacterized_protein_LOC101737582,_partial_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3480 A_BomaMG_comp13565_c0_seq1
408bp
FPKM:1.80 TPM:1.66
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