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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1501 A_BomaMG_comp11758_c0_seq1
4714bp
PREDICTED:_nucleoporin_NUP188_homolog_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006405 P RNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0017056 F structural constituent of nuclear pore
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
FPKM:1.90 TPM:1.76
1502 A_BomaMG_comp117590_c0_seq1
231bp
FPKM:3.63 TPM:3.36
1503 A_BomaMG_comp11759_c0_seq1
421bp
PREDICTED:_uncharacterized_protein_LOC101746233_[Bombyx_mori]
FPKM:2.55 TPM:2.36
1504 A_BomaMG_comp1175_c0_seq1
206bp
scavenger_mRNA_decapping_enzyme_[Dictyocaulus_viviparus]
FPKM:0.00 TPM:0.00
1505 A_BomaMG_comp11760_c0_seq1
1449bp
PREDICTED:_zinc_finger_CCHC_domain-containing_protein_4_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0046872 F metal ion binding
FPKM:2.48 TPM:2.30
1506 A_BomaMG_comp11761_c0_seq1
308bp
PREDICTED:_Fc_receptor-like_protein_5_isoform_X2_[Xenopus_tropicalis]
FPKM:1.06 TPM:0.98
1507 A_BomaMG_comp117621_c0_seq1
2261bp
PREDICTED:_disintegrin_and_metalloproteinase_domain-containing_protein_10_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0004175 F endopeptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005102 F signaling receptor binding
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0007162 P negative regulation of cell adhesion
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0007229 P integrin-mediated signaling pathway
GO:0007267 P cell-cell signaling
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0008284 P positive regulation of cell population proliferation
GO:0009986 C cell surface
GO:0010820 P positive regulation of T cell chemotaxis
GO:0012505 C endomembrane system
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019901 F protein kinase binding
GO:0022617 P extracellular matrix disassembly
GO:0030307 P positive regulation of cell growth
GO:0030335 P positive regulation of cell migration
GO:0034612 P response to tumor necrosis factor
GO:0042117 P monocyte activation
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0048013 P ephrin receptor signaling pathway
GO:0051088 P obsolete PMA-inducible membrane protein ectodomain proteolysis
GO:0051089 P constitutive protein ectodomain proteolysis
GO:0070062 C extracellular exosome
GO:0097038 C perinuclear endoplasmic reticulum
GO:0097197 C tetraspanin-enriched microdomain
FPKM:2.78 TPM:2.58
1508 A_BomaMG_comp11762_c0_seq1
267bp
FPKM:1.53 TPM:1.42
1509 A_BomaMG_comp11765_c0_seq1
224bp
unknown_unsecreted_protein_[Papilio_xuthus]
FPKM:0.68 TPM:0.63
1510 A_BomaMG_comp11765_c0_seq2
224bp
unknown_unsecreted_protein_[Papilio_xuthus]
FPKM:0.68 TPM:0.63
1511 A_BomaMG_comp117662_c0_seq1
740bp
FPKM:2.00 TPM:1.85
1512 A_BomaMG_comp11766_c0_seq1
615bp
FPKM:0.94 TPM:0.87
1513 A_BomaMG_comp11769_c0_seq1
242bp
PREDICTED:_uncharacterized_protein_LOC101742425_[Bombyx_mori]
FPKM:0.52 TPM:0.48
1514 A_BomaMG_comp1176_c0_seq1
375bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.75 TPM:1.62
1515 A_BomaMG_comp11770_c0_seq1
827bp
FPKM:2.62 TPM:2.43
1516 A_BomaMG_comp11770_c1_seq1
1003bp
FPKM:2.22 TPM:2.06
1517 A_BomaMG_comp11771_c0_seq1
302bp
PREDICTED:_syntaxin-binding_protein_5_isoform_X1_[Bombyx_mori]
FPKM:6.68 TPM:6.18
1518 A_BomaMG_comp11772_c0_seq1
996bp
FPKM:1.91 TPM:1.77
1519 A_BomaMG_comp11773_c0_seq1
922bp
PREDICTED:_uncharacterized_protein_LOC101744707_[Bombyx_mori]
FPKM:2.19 TPM:2.03
1520 A_BomaMG_comp11773_c1_seq1
438bp
FPKM:1.19 TPM:1.10
1521 A_BomaMG_comp11774_c0_seq1
793bp
PREDICTED:_uncharacterized_protein_LOC101745601_[Bombyx_mori]
FPKM:0.67 TPM:0.62
1522 A_BomaMG_comp11774_c0_seq2
729bp
PREDICTED:_uncharacterized_protein_LOC101745601_[Bombyx_mori]
FPKM:2.09 TPM:1.94
1523 A_BomaMG_comp11776_c0_seq1
234bp
FPKM:2.31 TPM:2.14
1524 A_BomaMG_comp117776_c0_seq1
326bp
PREDICTED:_voltage-dependent_P/Q-type_calcium_channel_subunit_alpha-1A_isoform_X8_[Danio_rerio]
FPKM:4.44 TPM:4.11
1525 A_BomaMG_comp11777_c0_seq1
907bp
putative_pol-like_protein_[Danaus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.85 TPM:2.64
1526 A_BomaMG_comp11777_c1_seq1
2029bp
PREDICTED:_uncharacterized_protein_LOC105389752_[Plutella_xylostella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.47 TPM:2.29
1527 A_BomaMG_comp11778_c0_seq1
1692bp
PREDICTED:_probable_DNA_mismatch_repair_protein_Msh6_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000400 F four-way junction DNA binding
GO:0000710 P meiotic mismatch repair
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005524 F ATP binding
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006301 P postreplication repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0009411 P response to UV
GO:0030983 F mismatched DNA binding
GO:0032137 F guanine/thymine mispair binding
GO:0032138 F single base insertion or deletion binding
GO:0032301 C MutSalpha complex
GO:0043570 P maintenance of DNA repeat elements
GO:0045910 P negative regulation of DNA recombination
FPKM:2.17 TPM:2.01
1528 A_BomaMG_comp117795_c0_seq1
487bp
FPKM:3.11 TPM:2.88
1529 A_BomaMG_comp1177_c0_seq1
221bp
PREDICTED:_zinc_finger_FYVE_domain-containing_protein_26_homolog_isoform_X1_[Bombyx_mori]
FPKM:2.13 TPM:1.98
1530 A_BomaMG_comp1177_c1_seq1
546bp
PREDICTED:_zinc_finger_FYVE_domain-containing_protein_26_homolog_isoform_X1_[Bombyx_mori]
FPKM:0.84 TPM:0.77
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