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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1111 A_BomaMG_comp11434_c0_seq1
531bp
sugar_kinase,_partial_[Prochlorococcus_sp._scB245a_520D2]
FPKM:2.33 TPM:2.16
1112 A_BomaMG_comp11436_c0_seq1
381bp
bowman-birk_serine_protease_inhibitor_family_protein_[Tetrahymena_thermophila_SB210]
FPKM:2.04 TPM:1.89
1113 A_BomaMG_comp11437_c0_seq1
348bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.84 TPM:2.63
1114 A_BomaMG_comp114386_c0_seq1
288bp
hypothetical_protein_L916_12852_[Phytophthora_parasitica]
FPKM:4.38 TPM:4.06
1115 A_BomaMG_comp11438_c0_seq1
556bp
PREDICTED:_replication_factor_C_subunit_3_[Papilio_machaon]
GO:0000722 P telomere maintenance via recombination
GO:0000731 P DNA synthesis involved in DNA repair
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0006271 P DNA strand elongation involved in DNA replication
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006296 P nucleotide-excision repair, DNA incision, 5'-to lesion
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0016887 F ATP hydrolysis activity
GO:0019985 P translesion synthesis
GO:0031390 C Ctf18 RFC-like complex
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0042276 P error-prone translesion synthesis
GO:0042769 P obsolete DNA damage response, detection of DNA damage
GO:0043142 F single-stranded DNA helicase activity
GO:0046683 P response to organophosphorus
GO:0070987 P error-free translesion synthesis
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
GO:1901796 P regulation of signal transduction by p53 class mediator
FPKM:2.35 TPM:2.18
1116 A_BomaMG_comp11438_c1_seq1
222bp
lactoylglutathione_lyase_[Sphingomonas_phyllosphaerae]
FPKM:1.40 TPM:1.29
1117 A_BomaMG_comp11439_c0_seq1
747bp
reverse_transcriptase_[Bombyx_mori]
FPKM:2.10 TPM:1.94
1118 A_BomaMG_comp1143_c0_seq1
486bp
FPKM:1.45 TPM:1.34
1119 A_BomaMG_comp114425_c0_seq1
1174bp
PREDICTED:_myotubularin-related_protein_13-like_[Plutella_xylostella]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005774 C vacuolar membrane
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0019208 F phosphatase regulator activity
GO:0019902 F phosphatase binding
GO:0035091 F phosphatidylinositol binding
GO:0042552 P myelination
GO:0042803 F protein homodimerization activity
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0051262 P protein tetramerization
FPKM:2.86 TPM:2.65
1120 A_BomaMG_comp11443_c0_seq1
683bp
PREDICTED:_anaphase-promoting_complex_subunit_5_isoform_X2_[Bombyx_mori]
GO:0005680 C anaphase-promoting complex
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016567 P protein ubiquitination
GO:0051301 P cell division
GO:0070979 P protein K11-linked ubiquitination
FPKM:2.43 TPM:2.25
1121 A_BomaMG_comp11444_c0_seq1
323bp
PREDICTED:_enhancer_of_mRNA-decapping_protein_3_[Amyelois_transitella]
FPKM:1.19 TPM:1.10
1122 A_BomaMG_comp11445_c0_seq1
1595bp
FPKM:2.08 TPM:1.93
1123 A_BomaMG_comp114460_c0_seq1
379bp
PREDICTED:_putative_nuclease_HARBI1_[Plutella_xylostella]
FPKM:2.92 TPM:2.70
1124 A_BomaMG_comp11449_c0_seq1
543bp
FPKM:2.63 TPM:2.43
1125 A_BomaMG_comp1144_c0_seq1
229bp
PREDICTED:_palmitoyltransferase_ZDHHC18-like_[Bombyx_mori]
FPKM:2.49 TPM:2.31
1126 A_BomaMG_comp11450_c0_seq1
1250bp
PREDICTED:_dual_specificity_tyrosine-phosphorylation-regulated_kinase_2_[Amyelois_transitella]
GO:0000151 C ubiquitin ligase complex
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007224 P smoothened signaling pathway
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030145 F manganese ion binding
GO:0030529 C ribonucleoprotein complex
GO:0042771 P intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043130 F ubiquitin binding
GO:0045725 P positive regulation of glycogen biosynthetic process
GO:0051534 P negative regulation of calcineurin-NFAT signaling cascade
FPKM:1.90 TPM:1.76
1127 A_BomaMG_comp11451_c0_seq1
873bp
PREDICTED:_DNA_repair_protein_RAD51_homolog_3_[Amyelois_transitella]
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000730 P DNA recombinase assembly
GO:0000794 C condensed nuclear chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007066 P female meiosis sister chromatid cohesion
GO:0007131 P reciprocal meiotic recombination
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008821 F crossover junction endodeoxyribonuclease activity
GO:0010212 P response to ionizing radiation
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0033065 C Rad51C-XRCC3 complex
GO:0042148 P strand invasion
GO:0048471 C perinuclear region of cytoplasm
GO:0048476 C Holliday junction resolvase complex
FPKM:2.50 TPM:2.31
1128 A_BomaMG_comp11452_c0_seq1
436bp
FPKM:2.26 TPM:2.10
1129 A_BomaMG_comp11452_c0_seq2
373bp
PREDICTED:_LOW_QUALITY_PROTEIN:_ufm1-specific_protease_2-like_[Papilio_machaon]
FPKM:0.00 TPM:0.00
1130 A_BomaMG_comp11453_c0_seq1
444bp
FPKM:3.23 TPM:2.99
1131 A_BomaMG_comp11453_c1_seq1
507bp
PREDICTED:_GPI_transamidase_component_PIG-S_isoform_X2_[Bombyx_mori]
GO:0003923 F GPI-anchor transamidase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016255 P attachment of GPI anchor to protein
GO:0042765 C GPI-anchor transamidase complex
FPKM:3.85 TPM:3.57
1132 A_BomaMG_comp114540_c0_seq1
1768bp
PREDICTED:_zinc_finger_protein_33A-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
FPKM:2.67 TPM:2.47
1133 A_BomaMG_comp114553_c0_seq1
374bp
FPKM:1.94 TPM:1.79
1134 A_BomaMG_comp11455_c0_seq1
456bp
PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
FPKM:2.10 TPM:1.94
1135 A_BomaMG_comp11456_c0_seq1
320bp
FPKM:4.14 TPM:3.83
1136 A_BomaMG_comp114572_c0_seq1
1445bp
FPKM:1.87 TPM:1.74
1137 A_BomaMG_comp11457_c0_seq1
466bp
FPKM:2.74 TPM:2.54
1138 A_BomaMG_comp11458_c0_seq1
987bp
gustatory_receptor_9_[Bombyx_mori]
GO:0001582 P detection of chemical stimulus involved in sensory perception of sweet taste
GO:0004871 F obsolete signal transducer activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0008343 P adult feeding behavior
GO:0008527 F taste receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032098 P regulation of appetite
GO:0033041 F sweet taste receptor activity
GO:0050909 P sensory perception of taste
GO:0050912 P detection of chemical stimulus involved in sensory perception of taste
GO:0050916 P sensory perception of sweet taste
GO:0060259 P regulation of feeding behavior
GO:0071332 P cellular response to fructose stimulus
FPKM:0.15 TPM:0.13
1139 A_BomaMG_comp11458_c0_seq2
1527bp
PREDICTED:_gustatory_receptor_9_isoform_X1_[Bombyx_mori]
GO:0001582 P detection of chemical stimulus involved in sensory perception of sweet taste
GO:0004871 F obsolete signal transducer activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0008343 P adult feeding behavior
GO:0008527 F taste receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032098 P regulation of appetite
GO:0033041 F sweet taste receptor activity
GO:0050909 P sensory perception of taste
GO:0050912 P detection of chemical stimulus involved in sensory perception of taste
GO:0050916 P sensory perception of sweet taste
GO:0060259 P regulation of feeding behavior
GO:0071332 P cellular response to fructose stimulus
FPKM:2.00 TPM:1.85
1140 A_BomaMG_comp1145_c0_seq1
247bp
UDP-glycosyltransferase_UGT40A1_[Bombyx_mori]
FPKM:1.45 TPM:1.34
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