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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
271 A_SariMSG_c10375_g1_i1
291bp
FPKM:5.27 TPM:3.36
272 A_SariMSG_c10376_g1_i1
369bp
FPKM:7.64 TPM:4.88
273 A_SariMSG_c10380_g1_i1
205bp
FPKM:6.40 TPM:4.08
274 A_SariMSG_c10381_g1_i1
320bp
PREDICTED:_protein_shuttle_craft_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007399 P nervous system development
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:2.55 TPM:1.63
275 A_SariMSG_c10382_g1_i1
365bp
Protein_GDAP2-like_[Papilio_xuthus]
FPKM:2.88 TPM:1.84
276 A_SariMSG_c10385_g1_i1
225bp
FPKM:2.42 TPM:1.55
277 A_SariMSG_c10386_g1_i1
264bp
FPKM:0.00 TPM:0.00
278 A_SariMSG_c10387_g1_i1
415bp
FPKM:1.64 TPM:1.04
279 A_SariMSG_c10388_g1_i1
385bp
stress-activated_map_kinase-interacting_protein_1_[Bombyx_mori]
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0017016 F small GTPase binding
GO:0019901 F protein kinase binding
GO:0021762 P substantia nigra development
GO:0031410 C cytoplasmic vesicle
GO:0031932 C TORC2 complex
GO:0043325 F phosphatidylinositol-3,4-bisphosphate binding
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0070300 F phosphatidic acid binding
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
FPKM:3.43 TPM:2.19
280 A_SariMSG_c10389_g1_i1
251bp
FPKM:2.44 TPM:1.56
281 A_SariMSG_c1038_g1_i1
710bp
FPKM:44.83 TPM:28.61
282 A_SariMSG_c10390_g1_i1
227bp
FPKM:4.73 TPM:3.02
283 A_SariMSG_c10391_g1_i1
218bp
AMP_deaminase,_partial_[Glyphipterix_quadragintapunctata]
GO:0003876 F AMP deaminase activity
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0006188 P IMP biosynthetic process
GO:0009117 P nucleotide metabolic process
GO:0009168 P purine ribonucleoside monophosphate biosynthetic process
GO:0016787 F hydrolase activity
GO:0019239 F deaminase activity
GO:0032264 P IMP salvage
GO:0043101 P purine-containing compound salvage
GO:0046033 P AMP metabolic process
GO:0046034 P ATP metabolic process
GO:0046039 P GTP metabolic process
GO:0046872 F metal ion binding
GO:0052652 P cyclic purine nucleotide metabolic process
GO:0097009 P energy homeostasis
FPKM:0.88 TPM:0.56
284 A_SariMSG_c10392_g1_i1
283bp
FPKM:2.79 TPM:1.78
285 A_SariMSG_c10393_g1_i1
274bp
spatacsin_isoform_X1_[Helicoverpa_armigera]
FPKM:3.99 TPM:2.55
286 A_SariMSG_c10394_g1_i1
312bp
FPKM:3.06 TPM:1.95
287 A_SariMSG_c10395_g1_i1
241bp
PREDICTED:_biotin--protein_ligase-like,_partial_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000785 C chromatin
GO:0003824 F catalytic activity
GO:0004077 F biotin-[acetyl-CoA-carboxylase] ligase activity
GO:0004078 F biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity
GO:0004079 F biotin-[methylmalonyl-CoA-carboxytransferase] ligase activity
GO:0004080 F biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005652 C nuclear lamina
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006464 P cellular protein modification process
GO:0006768 P biotin metabolic process
GO:0008152 P metabolic process
GO:0008283 P cell population proliferation
GO:0009305 P protein biotinylation
GO:0009374 F biotin binding
GO:0016363 C nuclear matrix
GO:0016570 P histone modification
GO:0016874 F ligase activity
GO:0018271 F biotin-protein ligase activity
GO:0019899 F enzyme binding
GO:0042803 F protein homodimerization activity
GO:0070781 P response to biotin
GO:0071110 P histone biotinylation
FPKM:5.39 TPM:3.44
288 A_SariMSG_c10397_g1_i1
289bp
PREDICTED:_uncharacterized_protein_LOC106138993_[Amyelois_transitella]
FPKM:2.67 TPM:1.71
289 A_SariMSG_c10399_g1_i1
311bp
PREDICTED:_serine/threonine-protein_kinase_SMG1_[Papilio_machaon]
FPKM:5.77 TPM:3.68
290 A_SariMSG_c1039_g1_i1
203bp
FPKM:3.30 TPM:2.11
291 A_SariMSG_c103_g1_i1
488bp
Retrotransposable_element_Tf2_155_kDa_protein_type_1_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:3.30 TPM:2.11
292 A_SariMSG_c10401_g1_i1
205bp
PREDICTED:_B-box_type_zinc_finger_protein_ncl-1-like_[Papilio_xuthus]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0043523 P regulation of neuron apoptotic process
GO:0046872 F metal ion binding
FPKM:2.13 TPM:1.36
293 A_SariMSG_c10402_g1_i1
415bp
FPKM:0.94 TPM:0.60
294 A_SariMSG_c10403_g1_i1
1044bp
PREDICTED:_glucose-6-phosphatase_[Papilio_machaon]
GO:0004346 F glucose-6-phosphatase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006094 P gluconeogenesis
GO:0015758 P glucose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0042593 P glucose homeostasis
GO:0050796 P regulation of insulin secretion
GO:0051156 P glucose 6-phosphate metabolic process
FPKM:2.01 TPM:1.28
295 A_SariMSG_c10405_g1_i1
338bp
FPKM:2.31 TPM:1.47
296 A_SariMSG_c10406_g1_i1
326bp
FPKM:4.58 TPM:2.92
297 A_SariMSG_c10407_g1_i1
216bp
PREDICTED:_probable_multidrug_resistance-associated_protein_lethal(2)03659_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0002576 P platelet degranulation
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0015662 F P-type ion transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016404 F 15-hydroxyprostaglandin dehydrogenase (NAD+) activity
GO:0016887 F ATP hydrolysis activity
GO:0031088 C platelet dense granule membrane
GO:0032310 P prostaglandin secretion
GO:0034220 P ion transmembrane transport
GO:0042384 P cilium assembly
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043225 F ATPase-coupled inorganic anion transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0055114 P obsolete oxidation-reduction process
GO:0098656 P anion transmembrane transport
FPKM:3.63 TPM:2.32
298 A_SariMSG_c10409_g1_i1
299bp
FPKM:2.91 TPM:1.86
299 A_SariMSG_c1040_g1_i1
373bp
FPKM:1.11 TPM:0.71
300 A_SariMSG_c10410_g1_i1
205bp
FPKM:19.19 TPM:12.25
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