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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1651 A_SariMSG_c11939_g1_i1
368bp
FPKM:4.26 TPM:2.72
1652 A_SariMSG_c11942_g1_i1
371bp
FPKM:15.98 TPM:10.20
1653 A_SariMSG_c11943_g1_i1
229bp
LOW_QUALITY_PROTEIN:_glycogen_[starch]_synthase-like,_partial_[Helicoverpa_armigera]
GO:0004373 F glycogen (starch) synthase activity
GO:0005776 C autophagosome
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0009267 P cellular response to starvation
GO:0009744 P response to sucrose
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0031410 C cytoplasmic vesicle
GO:0045819 P positive regulation of glycogen catabolic process
GO:0061723 P glycophagy
GO:0071329 P cellular response to sucrose stimulus
FPKM:0.77 TPM:0.49
1654 A_SariMSG_c11943_g2_i1
858bp
glycogen_[starch]_synthase_[Bombyx_mori]
GO:0004373 F glycogen (starch) synthase activity
GO:0005776 C autophagosome
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0009267 P cellular response to starvation
GO:0009744 P response to sucrose
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0031410 C cytoplasmic vesicle
GO:0045819 P positive regulation of glycogen catabolic process
GO:0061723 P glycophagy
GO:0071329 P cellular response to sucrose stimulus
FPKM:2.01 TPM:1.29
1655 A_SariMSG_c11944_g1_i1
269bp
FPKM:2.47 TPM:1.58
1656 A_SariMSG_c11944_g1_i2
327bp
FPKM:0.78 TPM:0.50
1657 A_SariMSG_c11946_g1_i1
377bp
FPKM:3.00 TPM:1.92
1658 A_SariMSG_c11947_g1_i1
1203bp
GRAM_domain-containing_protein_1B_isoform_X1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:3.06 TPM:1.95
1659 A_SariMSG_c11948_g1_i1
1216bp
5-methylcytosine_rRNA_methyltransferase_NSUN4_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0019843 F rRNA binding
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0070131 P positive regulation of mitochondrial translation
GO:0070181 F small ribosomal subunit rRNA binding
FPKM:3.31 TPM:2.12
1660 A_SariMSG_c11949_g1_i1
380bp
FPKM:4.31 TPM:2.75
1661 A_SariMSG_c1194_g1_i1
313bp
FPKM:1.14 TPM:0.73
1662 A_SariMSG_c11951_g1_i1
1836bp
B-cell_receptor-associated_protein_31_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006915 P apoptotic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
FPKM:59.49 TPM:37.97
1663 A_SariMSG_c11952_g1_i1
621bp
acyl-CoA_binding_protein_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0006810 P transport
GO:0008289 F lipid binding
FPKM:2.90 TPM:1.85
1664 A_SariMSG_c11953_g1_i1
370bp
nesprin-1_isoform_X2_[Bombyx_mori]
FPKM:0.84 TPM:0.54
1665 A_SariMSG_c11954_g1_i1
433bp
hypothetical_protein_RR46_14631_[Papilio_xuthus]
FPKM:6.13 TPM:3.91
1666 A_SariMSG_c11955_g1_i1
562bp
FPKM:3.31 TPM:2.11
1667 A_SariMSG_c11956_g1_i1
497bp
U6_snRNA_phosphodiesterase_isoform_X2_[Bombyx_mori]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0034477 P U6 snRNA 3'-end processing
GO:0045171 C intercellular bridge
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
FPKM:7.86 TPM:5.02
1668 A_SariMSG_c11957_g1_i1
427bp
FPKM:4.24 TPM:2.71
1669 A_SariMSG_c11957_g1_i2
349bp
FPKM:0.00 TPM:0.00
1670 A_SariMSG_c11958_g1_i1
225bp
transcription_factor_Sp3_isoform_X4_[Bombyx_mori]
FPKM:1.62 TPM:1.03
1671 A_SariMSG_c11959_g1_i1
299bp
FPKM:3.32 TPM:2.12
1672 A_SariMSG_c1195_g1_i1
225bp
FPKM:4.04 TPM:2.58
1673 A_SariMSG_c11960_g1_i1
322bp
DNA_polymerase_subunit_gamma-1,_mitochondrial_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005760 C gamma DNA polymerase complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006264 P mitochondrial DNA replication
GO:0007562 P eclosion
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008340 P determination of adult lifespan
GO:0008408 F 3'-5' exonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:4.68 TPM:2.99
1674 A_SariMSG_c11962_g1_i1
209bp
FPKM:23.90 TPM:15.25
1675 A_SariMSG_c11964_g1_i1
1111bp
FPKM:23.61 TPM:15.07
1676 A_SariMSG_c11965_g1_i1
551bp
FPKM:3.40 TPM:2.17
1677 A_SariMSG_c11966_g1_i1
441bp
hypothetical_protein_KGM_210934_[Danaus_plexippus_plexippus]
GO:0001558 P regulation of cell growth
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030856 P regulation of epithelial cell differentiation
FPKM:1.92 TPM:1.22
1678 A_SariMSG_c11967_g1_i1
368bp
FPKM:3.69 TPM:2.36
1679 A_SariMSG_c11968_g1_i1
512bp
FPKM:0.68 TPM:0.43
1680 A_SariMSG_c11968_g1_i2
223bp
FPKM:1.21 TPM:0.77
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