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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c11948_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		5-methylcytosine_rRNA_methyltransferase_NSUN4_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0019843 F rRNA binding
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0070131 P positive regulation of mitochondrial translation
GO:0070181 F small ribosomal subunit rRNA binding
Transcript
Level		FPKM:3.31 TPM:2.12
ORF EntryO_SariMSG2554_3prime_partial:A_SariMSG_c11948_g1_i1
Sequence
(Nucleotide)
TGTGCTCTTCCGATCTGACAACCTTCCGTAACTTCTTTCATATTGCTACAGACTCGTTTT
AAAACGAAAATACATTGGGCAAAGCTGAAAAAGAAAACGAGTGCTAAGTACAAAGCGTTG
AACCACTTCGATGACTTTTACGGTTCGGTTTTTGGTGATAAATGGGATTCCATGAGGGAA
GCATTGTTGCGACGCTCTAAATATGTAGCTGTTGTTAATAACTATGGAGATGCTGATGAG
ACTATGGAATACTTGACGAATAGGGGAGCACACTGCCTTAAGAAACTGATTACTGTACAA
AAAGAATTTCACACTCAATACCCATCAGAAAGTTCATCGATACAGAAAGATGATAATCAG
CATTCAAGCAGGCTACAAGAGTTTGCAGAAAAAACAACTTCAGATACAATATCCAAAATC
TATCCTAACAGTGTGAACATTCCTGATAGATTGGACTTAAGTGATTATGAACCAGAAAGT
AAGAATAAAACAGAAAAGGAGGAGAAAAATATAAAACAGTCAAATAAAACACTTGATGAA
TCACTGGCCGAAGCAATCATAGACGAGTCCCGTATCATTGACCCTACAATGGGAATAACA
TCGGAAGCTCTCTACCAGTTTATACCGGCCACAAAGTTAAAAGGAGCTGACGAATGGATA
CCTGAATCAGCTCATTACTCCTATCATTCAAAGGGCACAGATTTTCCTTTGGCTATAGAA
CCTGAGACTGATTTAGTATACCCTGAGCATCTGAAAGTGTTTACTTATGAGATGGACAGT
GATTGGACGTCATTCCCAGAGCCTAAGAGATGTCAAACAGGAGTATACAATTACTATCCG
ATGGACTGCGGTAGTGTGCTGGCAGTGCTAGCTCTCGGCTTGACAGCTGGCAATAGAGTG
CTTGATCTGTGCTCCGCCCCCGGAGGCAAAGCGCTAGTCGCTCTACAAACTCTCCTACCA
GATGTGGTTATATGCAATGATATATCAATATCCAGATCAAATAGAATGCGAAGGATTTTC
AAAGATTACTTGTTCGATTTCGAAACAAGCAATCGTTGGCAAGAACGGGTGTTATTCAAA
AGTGTTGACGGGCGACATTTCTTAGATGATCTTGGCTTTGATAAGGTACTTGTAGACGTG
CCGTGTACGACGGATAGACATTCCGTCAACGAAGACGAGAACAACATCTTCAGACCGGAC
AGATCGGAAGAGCGTC
(1216 bp)

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