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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
451 A_SariASG_c10853_g1_i1
215bp
FPKM:2.83 TPM:2.74
452 A_SariASG_c10855_g1_i1
267bp
FPKM:0.40 TPM:0.39
453 A_SariASG_c10856_g1_i1
216bp
FPKM:0.70 TPM:0.68
454 A_SariASG_c10858_g1_i1
205bp
FPKM:1.64 TPM:1.59
455 A_SariASG_c10859_g1_i1
366bp
FPKM:0.22 TPM:0.21
456 A_SariASG_c1085_g1_i1
207bp
FPKM:0.00 TPM:0.00
457 A_SariASG_c10860_g1_i1
261bp
FPKM:1.28 TPM:1.24
458 A_SariASG_c10862_g1_i1
209bp
FPKM:0.00 TPM:0.00
459 A_SariASG_c10863_g1_i1
220bp
FPKM:1.98 TPM:1.92
460 A_SariASG_c10864_g1_i1
359bp
FPKM:2.26 TPM:2.18
461 A_SariASG_c10866_g1_i1
330bp
FPKM:3.41 TPM:3.30
462 A_SariASG_c1086_g1_i1
215bp
FPKM:3.54 TPM:3.42
463 A_SariASG_c10870_g1_i1
243bp
FPKM:1.52 TPM:1.47
464 A_SariASG_c10872_g1_i1
342bp
FPKM:4.42 TPM:4.28
465 A_SariASG_c10876_g1_i1
245bp
FPKM:3.47 TPM:3.36
466 A_SariASG_c10877_g1_i1
248bp
FPKM:0.00 TPM:0.00
467 A_SariASG_c10878_g1_i1
582bp
FPKM:1.63 TPM:1.58
468 A_SariASG_c1087_g1_i1
424bp
FPKM:3.43 TPM:3.32
469 A_SariASG_c10881_g1_i1
214bp
FPKM:0.72 TPM:0.69
470 A_SariASG_c10883_g1_i1
266bp
DNA_topoisomerase_IIalpha,_partial_[Mus_musculus]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000287 F magnesium ion binding
GO:0000712 P resolution of meiotic recombination intermediates
GO:0000793 C condensed chromosome
GO:0000819 P sister chromatid segregation
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003916 F DNA topoisomerase activity
GO:0003918 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005080 F protein kinase C binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005814 C centriole
GO:0006259 P DNA metabolic process
GO:0006265 P DNA topological change
GO:0006266 P DNA ligation
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006312 P mitotic recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007059 P chromosome segregation
GO:0008022 F protein C-terminus binding
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008144 F obsolete drug binding
GO:0008301 F DNA binding, bending
GO:0009295 C nucleoid
GO:0009330 C DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
GO:0016853 F isomerase activity
GO:0016925 P protein sumoylation
GO:0019899 F enzyme binding
GO:0030261 P chromosome condensation
GO:0030263 P apoptotic chromosome condensation
GO:0040016 P embryonic cleavage
GO:0042752 P regulation of circadian rhythm
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0043065 P positive regulation of apoptotic process
GO:0043130 F ubiquitin binding
GO:0043234 C protein-containing complex
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0044822 F RNA binding
GO:0045070 P positive regulation of viral genome replication
GO:0045870 P positive regulation of single stranded viral RNA replication via double stranded DNA intermediate
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0048511 P rhythmic process
FPKM:0.82 TPM:0.79
471 A_SariASG_c10884_g1_i1
220bp
FPKM:1.98 TPM:1.92
472 A_SariASG_c10888_g1_i1
209bp
FPKM:0.77 TPM:0.75
473 A_SariASG_c1088_g1_i1
250bp
FPKM:0.00 TPM:0.00
474 A_SariASG_c10890_g1_i1
342bp
FPKM:3.69 TPM:3.57
475 A_SariASG_c10891_g1_i1
267bp
FPKM:4.85 TPM:4.70
476 A_SariASG_c10895_g1_i1
258bp
FPKM:0.88 TPM:0.85
477 A_SariASG_c10897_g1_i1
557bp
FPKM:5.07 TPM:4.91
478 A_SariASG_c10899_g1_i1
211bp
FPKM:13.47 TPM:13.04
479 A_SariASG_c108_g1_i1
326bp
PREDICTED:_uncharacterized_protein_LOC106720812_[Papilio_machaon]
FPKM:0.27 TPM:0.26
480 A_SariASG_c10900_g1_i1
216bp
40S_ribosomal_protein_S3a_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
FPKM:1.40 TPM:1.35
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