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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3781 A_SariASG_c16556_g1_i1
265bp
FPKM:3.70 TPM:3.58
3782 A_SariASG_c16557_g1_i1
817bp
RNA-binding_protein_25-like,_partial_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0042981 P regulation of apoptotic process
GO:0044822 F RNA binding
FPKM:32.92 TPM:31.88
3783 A_SariASG_c16558_g1_i1
218bp
PREDICTED:_regulatory-associated_protein_of_mTOR_[Papilio_machaon]
FPKM:6.79 TPM:6.58
3784 A_SariASG_c1655_g1_i1
297bp
unnamed_protein_product_[Mus_musculus]
GO:0001948 F protein binding
GO:0002474 P antigen processing and presentation of peptide antigen via MHC class I
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005790 C smooth endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0005829 C cytosol
GO:0005840 C ribosome
GO:0006457 P protein folding
GO:0007568 P aging
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
GO:0030424 C axon
GO:0032839 C dendrite cytoplasm
GO:0034185 F apolipoprotein binding
GO:0035255 F ionotropic glutamate receptor binding
GO:0042470 C melanosome
GO:0043025 C neuronal cell body
GO:0043197 C dendritic spine
GO:0043209 C myelin sheath
GO:0043234 C protein-containing complex
GO:0044233 C mitochondria-associated endoplasmic reticulum membrane
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048488 P synaptic vesicle endocytosis
GO:0051082 F unfolded protein binding
GO:0061077 P chaperone-mediated protein folding
GO:0070062 C extracellular exosome
GO:0071556 C integral component of lumenal side of endoplasmic reticulum membrane
GO:0072583 P clathrin-dependent endocytosis
FPKM:1.93 TPM:1.87
3785 A_SariASG_c16561_g1_i1
413bp
FPKM:10.20 TPM:9.88
3786 A_SariASG_c16562_g1_i1
262bp
FPKM:6.75 TPM:6.54
3787 A_SariASG_c16565_g1_i1
251bp
FPKM:2.80 TPM:2.72
3788 A_SariASG_c16568_g1_i1
283bp
PREDICTED:_glutamate_receptor_ionotropic,_NMDA_2B_isoform_X1_[Amyelois_transitella]
FPKM:0.71 TPM:0.69
3789 A_SariASG_c16571_g1_i1
238bp
FPKM:0.00 TPM:0.00
3790 A_SariASG_c16572_g1_i1
2057bp
ubiquitin-conjugating_enzyme_E2-17_kDa_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0000422 P autophagy of mitochondrion
GO:0000790 C chromatin
GO:0002039 F p53 binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007052 P mitotic spindle organization
GO:0016567 P protein ubiquitination
GO:0016574 P histone ubiquitination
GO:0016740 F transferase activity
GO:0019904 F protein domain specific binding
GO:0031625 F ubiquitin protein ligase binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032456 P endocytic recycling
GO:0033503 C HULC complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043066 P negative regulation of apoptotic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043518 P negative regulation of DNA damage response, signal transduction by p53 class mediator
GO:0051297 P centrosome cycle
GO:0051299 P centrosome separation
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:1902166 P negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
FPKM:101.71 TPM:98.50
3791 A_SariASG_c16573_g1_i1
1327bp
B-cell_receptor-associated_protein_31_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006915 P apoptotic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
FPKM:146.18 TPM:141.56
3792 A_SariASG_c16574_g1_i1
285bp
zonadhesin-like_[Bombyx_mori]
FPKM:2.45 TPM:2.38
3793 A_SariASG_c16574_g2_i1
280bp
PREDICTED:_zonadhesin-like_isoform_X2_[Papilio_machaon]
FPKM:0.73 TPM:0.70
3794 A_SariASG_c16575_g1_i1
209bp
FPKM:3.08 TPM:2.98
3795 A_SariASG_c16577_g1_i1
880bp
FPKM:45.07 TPM:43.65
3796 A_SariASG_c16577_g1_i2
352bp
FPKM:0.00 TPM:0.00
3797 A_SariASG_c16578_g1_i1
247bp
FPKM:6.81 TPM:6.59
3798 A_SariASG_c1657_g1_i1
355bp
FPKM:2.76 TPM:2.67
3799 A_SariASG_c16581_g1_i1
2715bp
PREDICTED:_beta-1,4-glucuronyltransferase_1_[Papilio_machaon]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0007411 P axon guidance
GO:0008532 F N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030311 P poly-N-acetyllactosamine biosynthetic process
GO:0035269 P protein O-linked mannosylation
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
FPKM:43.57 TPM:42.20
3800 A_SariASG_c16583_g1_i1
409bp
FPKM:7.99 TPM:7.74
3801 A_SariASG_c16584_g1_i1
349bp
ribosomal_protein_P2_[Manduca_sexta]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
FPKM:12.56 TPM:12.17
3802 A_SariASG_c16585_g1_i1
905bp
PREDICTED:_uncharacterized_protein_LOC106123166_[Papilio_xuthus]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0007414 P axonal defasciculation
GO:0007415 P defasciculation of motor neuron axon
GO:0008045 P motor neuron axon guidance
GO:0010906 P regulation of glucose metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030424 C axon
GO:0035335 P peptidyl-tyrosine dephosphorylation
FPKM:2.36 TPM:2.28
3803 A_SariASG_c16589_g1_i1
275bp
FPKM:1.14 TPM:1.10
3804 A_SariASG_c16590_g1_i1
325bp
FPKM:5.67 TPM:5.49
3805 A_SariASG_c16591_g1_i1
275bp
FPKM:1.89 TPM:1.83
3806 A_SariASG_c16593_g1_i1
301bp
FPKM:8.14 TPM:7.88
3807 A_SariASG_c16594_g1_i1
314bp
FPKM:6.63 TPM:6.42
3808 A_SariASG_c16595_g1_i1
1555bp
TAR_DNA_binding_protein_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001205 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001933 P negative regulation of protein phosphorylation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005726 C perichromatin fibrils
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010629 P negative regulation of gene expression
GO:0016607 C nuclear speck
GO:0030264 P nuclear fragmentation involved in apoptotic nuclear change
GO:0032024 P positive regulation of insulin secretion
GO:0034976 P response to endoplasmic reticulum stress
GO:0035061 C interchromatin granule
GO:0042802 F identical protein binding
GO:0043922 P negative regulation by host of viral transcription
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051726 P regulation of cell cycle
GO:0070935 P 3'-UTR-mediated mRNA stabilization
GO:0071765 P nuclear inner membrane organization
FPKM:38.62 TPM:37.40
3809 A_SariASG_c16597_g1_i1
605bp
ribosomal_protein_P2_[Manduca_sexta]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
FPKM:3767.35 TPM:3648.27
3810 A_SariASG_c16598_g1_i1
2948bp
farnesyl_pyrophosphate_syntase_[Bombyx_mori]
GO:0004161 F dimethylallyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0006695 P cholesterol biosynthetic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016126 P sterol biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
FPKM:40.33 TPM:39.05
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