SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c16557_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		RNA-binding_protein_25-like,_partial_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0042981 P regulation of apoptotic process
GO:0044822 F RNA binding
Transcript
Level		FPKM:32.92 TPM:31.88
ORF EntryO_SariASG1720_5prime_partial:A_SariASG_c16557_g1_i1
Sequence
(Nucleotide)
CCCCGGTGACCCCGCCCCCCGCCGCCGCTCCCGCCTCCACGGCGCCGTCCCGCCCGGGCG
GGCACCACACGCCGCACGGCAAGCGCCACCACCGGCACCGGCACCACCACCACGACCGAG
CCGCAACACCGCCGAGTCCAGACGGTGGGTCCACCCCCCCACCGCCGACGTCCACCACCC
ACGGACACGGCGGCACATCAGCAAACAGTTCTCCGATAACTATCAGCTTCAAGAACCACC
ACAAGCTGAGCCCGACCAGTGCAAGCGACACTCCCAACGAGACAGGACGACTGCGGCGCG
CGCACCACGCGTTCGCGTCAGAGGAGGACGACGAACACGAACATCATAGAGGTAAAGATA
AGAAAGATAAGGAGAAGAAGAGAAGTGAGAACGCGACAGACAAGGACAGCAAGAACGCGG
AGGAGAAGAGGAAGCACATAAAGAGTCTCATCGATAAGATACCGACGCAGAAGGAACAGC
TCTTCCAGTTCAAGCTCGACACCGCACAGATCGACAACACGCTGATGGAGAAGAAGATCC
GTCCGTGGATAAACAAGAAGATAATAGAGTACATCGGGGAGCCCGAGCCCACGCTCGTAG
ACTTCATCTGCAGCAAGGTGGTGGCCGGCTCCGCGCCGCAGGGCATCCTCGACGACGTGC
AGATGGTGTTAGACGAGGAGGCGGAGGTGTTCGTCGTGAAGATGTGGCGCTTGCTCATAT
ACGAGCTCGAGGCGAAACGCGCCGGCCTCCACAAGTGATGACGTCACGCACCCCACCACC
ACCGCCACCACCACCACCCCCCACCGCTACCCCCCAG
(817 bp)

- SilkBase 1999-2023 -