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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3601 A_SariASG_c16297_g1_i1
303bp
FPKM:0.93 TPM:0.90
3602 A_SariASG_c16298_g1_i1
411bp
FPKM:1.26 TPM:1.22
3603 A_SariASG_c162_g1_i1
641bp
unconventional_myosin-XV_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0042472 P inner ear morphogenesis
GO:0042995 C cell projection
GO:0070062 C extracellular exosome
FPKM:68.41 TPM:66.25
3604 A_SariASG_c16303_g1_i1
740bp
probable_ribosome_production_factor_1_[Bombyx_mori]
GO:0000027 P ribosomal large subunit assembly
GO:0000460 P maturation of 5.8S rRNA
GO:0000470 P maturation of LSU-rRNA
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0019843 F rRNA binding
GO:0030687 C preribosome, large subunit precursor
GO:0042134 F rRNA primary transcript binding
GO:0042254 P ribosome biogenesis
FPKM:8.37 TPM:8.11
3605 A_SariASG_c16303_g1_i2
1063bp
probable_ribosome_production_factor_1_[Helicoverpa_armigera]
GO:0000027 P ribosomal large subunit assembly
GO:0000460 P maturation of 5.8S rRNA
GO:0000470 P maturation of LSU-rRNA
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0019843 F rRNA binding
GO:0030687 C preribosome, large subunit precursor
GO:0042134 F rRNA primary transcript binding
GO:0042254 P ribosome biogenesis
FPKM:35.23 TPM:34.12
3606 A_SariASG_c16306_g1_i1
430bp
FPKM:2.35 TPM:2.28
3607 A_SariASG_c16308_g1_i1
223bp
uncharacterized_protein_LOC110379400_[Helicoverpa_armigera]
FPKM:1.27 TPM:1.23
3608 A_SariASG_c16309_g1_i1
273bp
FPKM:7.31 TPM:7.08
3609 A_SariASG_c16310_g1_i1
535bp
Yokozuna_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.56 TPM:2.48
3610 A_SariASG_c16314_g1_i1
222bp
FPKM:3.22 TPM:3.12
3611 A_SariASG_c16317_g1_i1
310bp
FPKM:1.77 TPM:1.72
3612 A_SariASG_c16318_g1_i1
221bp
FPKM:2.61 TPM:2.53
3613 A_SariASG_c16319_g1_i1
320bp
FPKM:1.11 TPM:1.08
3614 A_SariASG_c16321_g1_i1
304bp
FPKM:1.23 TPM:1.19
3615 A_SariASG_c16323_g1_i1
1857bp
actin-depolymerizing_factor_1_[Antheraea_pernyi]
GO:0000281 P mitotic cytokinesis
GO:0000902 P cell morphogenesis
GO:0000915 P actomyosin contractile ring assembly
GO:0001736 P establishment of planar polarity
GO:0001737 P establishment of imaginal disc-derived wing hair orientation
GO:0001745 P compound eye morphogenesis
GO:0003779 F actin binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005875 C microtubule associated complex
GO:0007015 P actin filament organization
GO:0007298 P border follicle cell migration
GO:0007409 P axonogenesis
GO:0008585 P female gonad development
GO:0010591 P regulation of lamellipodium assembly
GO:0015629 C actin cytoskeleton
GO:0016319 P mushroom body development
GO:0016363 C nuclear matrix
GO:0030041 P actin filament polymerization
GO:0030042 P actin filament depolymerization
GO:0036011 P imaginal disc-derived leg segmentation
GO:0042052 P rhabdomere development
GO:0042067 P establishment of ommatidial planar polarity
GO:0048749 P compound eye development
FPKM:234.71 TPM:227.29
3616 A_SariASG_c16324_g1_i1
207bp
FPKM:3.18 TPM:3.08
3617 A_SariASG_c16325_g1_i1
557bp
FPKM:1.32 TPM:1.28
3618 A_SariASG_c16325_g1_i2
361bp
FPKM:0.34 TPM:0.33
3619 A_SariASG_c16326_g1_i1
218bp
Mod_[Danaus_plexippus_plexippus]
FPKM:1.36 TPM:1.32
3620 A_SariASG_c16327_g1_i1
300bp
FPKM:1.26 TPM:1.22
3621 A_SariASG_c16330_g1_i1
207bp
FPKM:0.00 TPM:0.00
3622 A_SariASG_c16332_g1_i1
346bp
PREDICTED:_zinc_finger_SWIM_domain-containing_protein_5-like_[Amyelois_transitella]
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0048812 P neuron projection morphogenesis
GO:2001222 P regulation of neuron migration
FPKM:0.24 TPM:0.23
3623 A_SariASG_c16334_g1_i1
597bp
reverse_transcriptase_-_silkworm_transposon_Pao
FPKM:1.57 TPM:1.52
3624 A_SariASG_c16336_g1_i1
203bp
FPKM:1.69 TPM:1.64
3625 A_SariASG_c16339_g1_i1
279bp
FPKM:1.47 TPM:1.42
3626 A_SariASG_c16343_g1_i1
442bp
uncharacterized_protein_LOC101740538_[Bombyx_mori]
FPKM:0.97 TPM:0.94
3627 A_SariASG_c16344_g1_i1
227bp
PREDICTED:_uncharacterized_protein_LOC106710892_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.42 TPM:2.35
3628 A_SariASG_c16347_g1_i1
236bp
FPKM:1.64 TPM:1.59
3629 A_SariASG_c1634_g1_i1
329bp
FPKM:3.17 TPM:3.07
3630 A_SariASG_c16351_g1_i1
294bp
FPKM:3.94 TPM:3.82
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