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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3571 A_SariASG_c16256_g1_i1
220bp
heterogeneous_nuclear_ribonucleoprotein_U_isoform_X2_[Microcebus_murinus]
GO:0000166 F nucleotide binding
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001649 P osteoblast differentiation
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005697 C telomerase holoenzyme complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0032211 P negative regulation of telomere maintenance via telomerase
GO:0032922 P circadian regulation of gene expression
GO:0036464 C cytoplasmic ribonucleoprotein granule
GO:0044822 F RNA binding
GO:0048511 P rhythmic process
GO:0055013 P cardiac muscle cell development
GO:0070034 F telomerase RNA binding
GO:0070934 P CRD-mediated mRNA stabilization
GO:0070937 C CRD-mediated mRNA stability complex
GO:0071013 C catalytic step 2 spliceosome
FPKM:4.63 TPM:4.48
3572 A_SariASG_c16257_g1_i1
400bp
FPKM:3.20 TPM:3.10
3573 A_SariASG_c16258_g1_i1
344bp
peroxisomal_N(1)-acetyl-spermine/spermidine_oxidase-like_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0008215 P spermine metabolic process
GO:0016491 F oxidoreductase activity
GO:0052899 F N(1),N(12)-diacetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity
GO:0052901 F spermine:oxygen oxidoreductase (spermidine-forming) activity
GO:0052902 F spermidine:oxygen oxidoreductase (3-aminopropanal-forming) activity
GO:0052903 F N1-acetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity
GO:0052904 F N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.43 TPM:2.36
3574 A_SariASG_c16261_g1_i1
261bp
FPKM:0.85 TPM:0.82
3575 A_SariASG_c16263_g1_i1
219bp
PREDICTED:_uncharacterized_protein_LOC105386785_[Plutella_xylostella]
FPKM:3.35 TPM:3.24
3576 A_SariASG_c16265_g1_i1
257bp
FPKM:1.77 TPM:1.71
3577 A_SariASG_c16267_g1_i1
511bp
sid-1-related_gene3_precursor_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033227 P dsRNA transport
GO:0051033 F RNA transmembrane transporter activity
FPKM:3.64 TPM:3.53
3578 A_SariASG_c16269_g1_i1
230bp
FPKM:9.94 TPM:9.62
3579 A_SariASG_c1626_g1_i1
494bp
uncharacterized_protein_LOC110374285_[Helicoverpa_armigera]
FPKM:1.37 TPM:1.32
3580 A_SariASG_c16270_g1_i1
212bp
hypothetical_protein,_partial_[Acinetobacter_baumannii]
FPKM:4.43 TPM:4.29
3581 A_SariASG_c16271_g1_i1
486bp
Eef1g_protein_[Mus_musculus]
GO:0003746 F translation elongation factor activity
GO:0004364 F glutathione transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0006749 P glutathione metabolic process
GO:0009615 P response to virus
GO:0016020 C membrane
GO:0070062 C extracellular exosome
FPKM:2.10 TPM:2.03
3582 A_SariASG_c16271_g1_i2
230bp
rCG47618,_isoform_CRA_c_[Rattus_norvegicus]
GO:0003746 F translation elongation factor activity
GO:0004364 F glutathione transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0006749 P glutathione metabolic process
GO:0009615 P response to virus
GO:0016020 C membrane
GO:0070062 C extracellular exosome
FPKM:0.00 TPM:0.00
3583 A_SariASG_c16272_g1_i1
214bp
FPKM:3.59 TPM:3.47
3584 A_SariASG_c16273_g1_i1
2319bp
protein_hunchback-like_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0035282 P segmentation
GO:0040034 P regulation of development, heterochronic
GO:0046872 F metal ion binding
FPKM:34.91 TPM:33.81
3585 A_SariASG_c16273_g1_i2
2146bp
protein_hunchback-like_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0035282 P segmentation
GO:0040034 P regulation of development, heterochronic
GO:0046872 F metal ion binding
FPKM:4.28 TPM:4.15
3586 A_SariASG_c16276_g1_i1
227bp
FPKM:1.21 TPM:1.17
3587 A_SariASG_c16277_g1_i1
278bp
FPKM:1.11 TPM:1.07
3588 A_SariASG_c16279_g1_i1
260bp
FPKM:5.59 TPM:5.41
3589 A_SariASG_c16281_g1_i1
383bp
FPKM:0.81 TPM:0.78
3590 A_SariASG_c16283_g1_i1
228bp
FPKM:4.19 TPM:4.06
3591 A_SariASG_c16284_g1_i1
380bp
FPKM:3.28 TPM:3.17
3592 A_SariASG_c16285_g1_i1
427bp
FPKM:3.40 TPM:3.29
3593 A_SariASG_c16288_g1_i1
488bp
FPKM:1.87 TPM:1.81
3594 A_SariASG_c16288_g1_i2
394bp
FPKM:0.10 TPM:0.10
3595 A_SariASG_c1628_g1_i1
360bp
FPKM:0.90 TPM:0.87
3596 A_SariASG_c16291_g1_i1
278bp
FPKM:2.59 TPM:2.51
3597 A_SariASG_c16292_g1_i1
357bp
FPKM:2.96 TPM:2.87
3598 A_SariASG_c16293_g1_i1
238bp
FPKM:1.60 TPM:1.55
3599 A_SariASG_c16295_g1_i1
534bp
FPKM:1.96 TPM:1.89
3600 A_SariASG_c16296_g1_i1
348bp
FPKM:2.38 TPM:2.31
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