SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/68433
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3001 A_SariASG_c15360_g1_i1
434bp
FPKM:1.66 TPM:1.60
3002 A_SariASG_c15362_g1_i1
314bp
FPKM:2.02 TPM:1.95
3003 A_SariASG_c15364_g1_i1
221bp
FPKM:3.92 TPM:3.79
3004 A_SariASG_c15365_g1_i1
241bp
FPKM:3.10 TPM:3.00
3005 A_SariASG_c15369_g1_i1
269bp
FPKM:3.58 TPM:3.46
3006 A_SariASG_c15371_g1_i1
211bp
PREDICTED:_SCAN_domain-containing_protein_3_[Camponotus_floridanus]
FPKM:2.99 TPM:2.90
3007 A_SariASG_c15372_g1_i1
239bp
FPKM:3.70 TPM:3.58
3008 A_SariASG_c15373_g1_i1
351bp
FPKM:4.22 TPM:4.09
3009 A_SariASG_c15375_g1_i1
396bp
FPKM:2.30 TPM:2.22
3010 A_SariASG_c15377_g1_i1
911bp
ras-like_protein_2_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007265 P Ras protein signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019003 F GDP binding
FPKM:61.01 TPM:59.08
3011 A_SariASG_c15378_g1_i1
454bp
FPKM:5.10 TPM:4.94
3012 A_SariASG_c15379_g1_i1
252bp
FPKM:1.39 TPM:1.34
3013 A_SariASG_c1537_g1_i1
221bp
FPKM:2.61 TPM:2.53
3014 A_SariASG_c15380_g1_i1
403bp
atlastin_[Bombyx_mori]
FPKM:1.86 TPM:1.80
3015 A_SariASG_c15381_g1_i1
210bp
FPKM:1.52 TPM:1.47
3016 A_SariASG_c15382_g1_i1
201bp
uncharacterized_protein_LOC110384853_[Bombyx_mori]
FPKM:5.23 TPM:5.07
3017 A_SariASG_c15384_g1_i1
667bp
PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_[Amyelois_transitella]
FPKM:1.99 TPM:1.93
3018 A_SariASG_c15386_g1_i1
542bp
FPKM:1.92 TPM:1.85
3019 A_SariASG_c15386_g1_i2
294bp
FPKM:0.00 TPM:0.00
3020 A_SariASG_c15387_g1_i1
256bp
FPKM:2.67 TPM:2.59
3021 A_SariASG_c15388_g1_i1
333bp
FPKM:1.55 TPM:1.50
3022 A_SariASG_c15390_g1_i1
207bp
FPKM:0.79 TPM:0.77
3023 A_SariASG_c15392_g1_i1
461bp
protein_Fe65_homolog_isoform_X2_[Bombyx_mori]
GO:0001540 F amyloid-beta binding
GO:0002119 P nematode larval development
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007631 P feeding behavior
GO:0008134 F transcription factor binding
GO:0009792 P embryo development ending in birth or egg hatching
FPKM:1.06 TPM:1.02
3024 A_SariASG_c15394_g1_i1
215bp
FPKM:2.12 TPM:2.05
3025 A_SariASG_c15396_g1_i1
320bp
hemicentin-1-like_[Helicoverpa_armigera]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005938 C cell cortex
GO:0008150 P biological_process
GO:0030054 C cell junction
GO:0050896 P response to stimulus
FPKM:3.06 TPM:2.96
3026 A_SariASG_c1539_g1_i1
205bp
teneurin-m_isoform_X4_[Helicoverpa_armigera]
GO:0001745 P compound eye morphogenesis
GO:0001941 P postsynaptic membrane organization
GO:0005515 F protein binding
GO:0005578 C extracellular matrix
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007274 P neuromuscular synaptic transmission
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008039 P synaptic target recognition
GO:0008045 P motor neuron axon guidance
GO:0008360 P regulation of cell shape
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016200 P synaptic target attraction
GO:0019233 P sensory perception of pain
GO:0022416 P chaeta development
GO:0030054 C cell junction
GO:0031005 F filamin binding
GO:0031122 P cytoplasmic microtubule organization
GO:0031594 C neuromuscular junction
GO:0034110 P regulation of homotypic cell-cell adhesion
GO:0034116 P positive regulation of heterotypic cell-cell adhesion
GO:0040017 P positive regulation of locomotion
GO:0042051 P compound eye photoreceptor development
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0045467 P R7 cell development
GO:0046982 F protein heterodimerization activity
GO:0048058 P compound eye corneal lens development
GO:0048499 P synaptic vesicle membrane organization
GO:0048790 P maintenance of presynaptic active zone structure
GO:0050808 P synapse organization
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0097090 P presynaptic membrane organization
GO:2000331 P regulation of terminal button organization
FPKM:4.09 TPM:3.96
3027 A_SariASG_c153_g1_i1
436bp
FPKM:14.63 TPM:14.17
3028 A_SariASG_c15403_g1_i1
246bp
FPKM:3.44 TPM:3.33
3029 A_SariASG_c15406_g1_i1
319bp
FPKM:9.50 TPM:9.20
3030 A_SariASG_c15407_g1_i1
455bp
FPKM:3.70 TPM:3.58
previous next from show/68433

- SilkBase 1999-2023 -