SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/68433
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2551 A_SariASG_c14548_g1_i1
222bp
FPKM:1.29 TPM:1.25
2552 A_SariASG_c14549_g1_i1
246bp
RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Danaus_plexippus_plexippus]
FPKM:0.98 TPM:0.95
2553 A_SariASG_c14550_g1_i1
205bp
asparagine_synthetase_domain-containing_protein_CG17486_[Helicoverpa_armigera]
GO:0004066 F asparagine synthase (glutamine-hydrolyzing) activity
GO:0005829 C cytosol
GO:0006529 P asparagine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0042803 F protein homodimerization activity
FPKM:5.73 TPM:5.55
2554 A_SariASG_c14554_g1_i1
337bp
hypothetical_protein_KGM_206570_[Danaus_plexippus_plexippus]
FPKM:2.52 TPM:2.44
2555 A_SariASG_c14555_g1_i1
340bp
FPKM:0.82 TPM:0.80
2556 A_SariASG_c14555_g1_i2
326bp
FPKM:4.48 TPM:4.34
2557 A_SariASG_c14561_g1_i1
341bp
PREDICTED:_uncharacterized_protein_LOC106131045_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.48 TPM:1.44
2558 A_SariASG_c14562_g1_i1
463bp
Uncharacterized_protein_OBRU01_22231_[Operophtera_brumata]
FPKM:2.25 TPM:2.18
2559 A_SariASG_c14565_g1_i1
296bp
FPKM:1.30 TPM:1.25
2560 A_SariASG_c14568_g1_i1
233bp
FPKM:3.39 TPM:3.28
2561 A_SariASG_c14571_g1_i1
208bp
PREDICTED:_uncharacterized_protein_LOC106137686_[Amyelois_transitella]
FPKM:0.00 TPM:0.00
2562 A_SariASG_c1457_g1_i1
285bp
FPKM:0.35 TPM:0.34
2563 A_SariASG_c14582_g1_i1
230bp
FPKM:4.68 TPM:4.53
2564 A_SariASG_c14582_g2_i1
204bp
FPKM:0.83 TPM:0.81
2565 A_SariASG_c14583_g1_i1
210bp
zinc_finger_protein_62-like_[Helicoverpa_armigera]
FPKM:3.04 TPM:2.94
2566 A_SariASG_c14586_g1_i1
227bp
FPKM:1.82 TPM:1.76
2567 A_SariASG_c14588_g1_i1
366bp
serine-rich_protein4,_partial_[Samia_ricini]
FPKM:1.75 TPM:1.69
2568 A_SariASG_c14589_g1_i1
1309bp
PREDICTED:_serine/threonine-protein_phosphatase_PP1-beta_catalytic_subunit_[Papilio_polytes]
GO:0004721 F phosphoprotein phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006470 P protein dephosphorylation
GO:0007049 P cell cycle
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0030155 P regulation of cell adhesion
GO:0046872 F metal ion binding
GO:0050115 F myosin-light-chain-phosphatase activity
GO:0051301 P cell division
GO:0072357 C PTW/PP1 phosphatase complex
FPKM:78.02 TPM:75.56
2569 A_SariASG_c1458_g1_i1
217bp
FPKM:3.44 TPM:3.33
2570 A_SariASG_c14594_g1_i1
505bp
FPKM:1.72 TPM:1.67
2571 A_SariASG_c14595_g1_i1
221bp
FPKM:1.31 TPM:1.26
2572 A_SariASG_c14599_g1_i1
474bp
FPKM:1.45 TPM:1.40
2573 A_SariASG_c1459_g1_i1
336bp
FPKM:2.03 TPM:1.97
2574 A_SariASG_c145_g1_i1
337bp
FPKM:2.78 TPM:2.69
2575 A_SariASG_c14603_g1_i1
205bp
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X1_[Amyelois_transitella]
FPKM:1.64 TPM:1.59
2576 A_SariASG_c14604_g1_i1
329bp
FPKM:1.85 TPM:1.79
2577 A_SariASG_c14609_g1_i1
292bp
FPKM:0.33 TPM:0.32
2578 A_SariASG_c1460_g1_i1
202bp
FPKM:3.43 TPM:3.32
2579 A_SariASG_c14610_g1_i1
225bp
PREDICTED:_uncharacterized_protein_LOC105313694_[Amphimedon_queenslandica]
FPKM:1.86 TPM:1.80
2580 A_SariASG_c14613_g1_i1
272bp
FPKM:1.55 TPM:1.50
previous next from show/68433

- SilkBase 1999-2023 -