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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2521 A_SariASG_c14490_g1_i1
284bp
FPKM:0.00 TPM:0.00
2522 A_SariASG_c14490_g2_i1
363bp
FPKM:1.55 TPM:1.50
2523 A_SariASG_c14491_g1_i1
688bp
heterogeneous_nuclear_ribonucleoprotein_27C_isoform_X5_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003697 F single-stranded DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007298 P border follicle cell migration
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007319 P negative regulation of oskar mRNA translation
GO:0007411 P axon guidance
GO:0030529 C ribonucleoprotein complex
GO:0043186 C P granule
GO:0043234 C protein-containing complex
GO:0045451 P pole plasm oskar mRNA localization
GO:0045727 P positive regulation of translation
GO:0046331 P lateral inhibition
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0048027 F mRNA 5'-UTR binding
FPKM:72.97 TPM:70.67
2524 A_SariASG_c14496_g1_i1
228bp
FPKM:1.20 TPM:1.16
2525 A_SariASG_c144_g1_i1
584bp
FPKM:4.00 TPM:3.87
2526 A_SariASG_c14506_g1_i1
325bp
FPKM:1.35 TPM:1.31
2527 A_SariASG_c1450_g1_i1
209bp
FPKM:3.85 TPM:3.73
2528 A_SariASG_c14513_g1_i1
270bp
FPKM:1.18 TPM:1.15
2529 A_SariASG_c14514_g1_i1
386bp
FPKM:2.59 TPM:2.51
2530 A_SariASG_c14515_g1_i1
249bp
FPKM:0.48 TPM:0.46
2531 A_SariASG_c14518_g1_i1
213bp
FPKM:2.91 TPM:2.82
2532 A_SariASG_c14521_g1_i1
227bp
FPKM:0.61 TPM:0.59
2533 A_SariASG_c14522_g1_i1
256bp
putative_DNA_mismatch_repair_protein_pms2_[Danaus_plexippus_plexippus]
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007126 P meiotic cell cycle
GO:0015630 C microtubule cytoskeleton
GO:0016446 P somatic hypermutation of immunoglobulin genes
GO:0016447 P somatic recombination of immunoglobulin gene segments
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030983 F mismatched DNA binding
GO:0032138 F single base insertion or deletion binding
GO:0032300 C mismatch repair complex
GO:0032389 C MutLalpha complex
GO:0032407 F MutSalpha complex binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:3.57 TPM:3.45
2534 A_SariASG_c14527_g1_i1
264bp
FPKM:0.83 TPM:0.80
2535 A_SariASG_c14529_g1_i1
572bp
FPKM:2.45 TPM:2.37
2536 A_SariASG_c1452_g1_i1
285bp
FPKM:7.71 TPM:7.47
2537 A_SariASG_c14530_g1_i1
218bp
FPKM:6.11 TPM:5.92
2538 A_SariASG_c14531_g1_i1
270bp
FPKM:1.18 TPM:1.15
2539 A_SariASG_c14532_g1_i1
386bp
zinc_finger_protein_OZF_[Bombyx_mori]
FPKM:2.20 TPM:2.13
2540 A_SariASG_c14534_g1_i1
234bp
RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Danaus_plexippus_plexippus]
FPKM:1.12 TPM:1.08
2541 A_SariASG_c14536_g1_i1
383bp
putative_Juvenile_hormone-inducible_protein_[Operophtera_brumata]
FPKM:2.02 TPM:1.96
2542 A_SariASG_c14539_g1_i1
213bp
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
FPKM:0.73 TPM:0.70
2543 A_SariASG_c14540_g1_i1
247bp
FPKM:1.46 TPM:1.41
2544 A_SariASG_c14541_g1_i1
229bp
FPKM:5.91 TPM:5.73
2545 A_SariASG_c14542_g1_i1
225bp
FPKM:3.10 TPM:3.01
2546 A_SariASG_c14544_g1_i1
264bp
FPKM:0.00 TPM:0.00
2547 A_SariASG_c14545_g1_i1
276bp
FPKM:0.00 TPM:0.00
2548 A_SariASG_c14545_g1_i2
301bp
FPKM:3.13 TPM:3.03
2549 A_SariASG_c14546_g1_i1
415bp
FPKM:2.31 TPM:2.24
2550 A_SariASG_c14547_g1_i1
594bp
PREDICTED:_hemicentin-1_isoform_X1_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0009897 C external side of plasma membrane
GO:0015026 F coreceptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
GO:0070062 C extracellular exosome
FPKM:1.58 TPM:1.53
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